Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
ATXN1P54253 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.4■□□□□ 0.86
ATXN1P54253 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.4■□□□□ 0.86
ATXN1P54253 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 AC124016.1-201ENST00000609552 612 ntBASIC20.4■□□□□ 0.86
ATXN1P54253 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATXN1P54253 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.4■□□□□ 0.86
ATXN1P54253 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATXN1P54253 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATXN1P54253 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATXN1P54253 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ATXN1P54253 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATXN1P54253 NBPF21P-201ENST00000425093 1451 ntBASIC20.39■□□□□ 0.85
ATXN1P54253 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN1P54253 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
ATXN1P54253 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.39■□□□□ 0.85
ATXN1P54253 AC239809.2-201ENST00000415381 517 ntBASIC20.39■□□□□ 0.85
ATXN1P54253 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.39■□□□□ 0.85
ATXN1P54253 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.39■□□□□ 0.85
ATXN1P54253 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.39■□□□□ 0.85
ATXN1P54253 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.39■□□□□ 0.85
ATXN1P54253 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.39■□□□□ 0.85
ATXN1P54253 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.39■□□□□ 0.85
ATXN1P54253 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.39■□□□□ 0.85
ATXN1P54253 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATXN1P54253 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATXN1P54253 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATXN1P54253 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.38■□□□□ 0.85
ATXN1P54253 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.38■□□□□ 0.85
ATXN1P54253 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.38■□□□□ 0.85
ATXN1P54253 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.38■□□□□ 0.85
ATXN1P54253 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATXN1P54253 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATXN1P54253 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.38■□□□□ 0.85
ATXN1P54253 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
ATXN1P54253 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ATXN1P54253 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.37■□□□□ 0.85
ATXN1P54253 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.37■□□□□ 0.85
ATXN1P54253 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.37■□□□□ 0.85
ATXN1P54253 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.37■□□□□ 0.85
ATXN1P54253 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ATXN1P54253 YBX1P10-201ENST00000444752 975 ntBASIC20.37■□□□□ 0.85
ATXN1P54253 AC133681.1-201ENST00000465482 601 ntBASIC20.37■□□□□ 0.85
ATXN1P54253 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.37■□□□□ 0.85
ATXN1P54253 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.37■□□□□ 0.85
ATXN1P54253 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.37■□□□□ 0.85
ATXN1P54253 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.37■□□□□ 0.85
ATXN1P54253 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATXN1P54253 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATXN1P54253 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATXN1P54253 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
ATXN1P54253 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATXN1P54253 AC007952.6-201ENST00000573168 2673 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms