Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.21■□□□□ 0.67
LIMK1P53667 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK1P53667 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LIMK1P53667 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
LIMK1P53667 ATP5G2P1-201ENST00000433580 426 ntBASIC19.21■□□□□ 0.67
LIMK1P53667 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK1P53667 AL359075.1-203ENST00000462729 1002 ntBASIC19.21■□□□□ 0.67
LIMK1P53667 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.21■□□□□ 0.67
LIMK1P53667 RCC2P6-201ENST00000526625 1557 ntBASIC19.21■□□□□ 0.67
LIMK1P53667 GPALPP1-207ENST00000611650 899 ntBASIC19.21■□□□□ 0.67
LIMK1P53667 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK1P53667 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.21■□□□□ 0.67
LIMK1P53667 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LIMK1P53667 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.2■□□□□ 0.66
LIMK1P53667 AC246785.2-201ENST00000432512 513 ntBASIC19.2■□□□□ 0.66
LIMK1P53667 FDX1P1-201ENST00000449115 551 ntBASIC19.2■□□□□ 0.66
LIMK1P53667 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.2■□□□□ 0.66
LIMK1P53667 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.2■□□□□ 0.66
LIMK1P53667 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 AC140113.3-201ENST00000605663 199 ntBASIC19.2■□□□□ 0.66
LIMK1P53667 PTBP1P-201ENST00000554374 1601 ntBASIC19.2■□□□□ 0.66
LIMK1P53667 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.2■□□□□ 0.66
LIMK1P53667 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
LIMK1P53667 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.2■□□□□ 0.66
LIMK1P53667 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.2■□□□□ 0.66
LIMK1P53667 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LIMK1P53667 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LIMK1P53667 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
LIMK1P53667 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
LIMK1P53667 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 AC004951.3-201ENST00000418645 1148 ntBASIC19.19■□□□□ 0.66
LIMK1P53667 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.19■□□□□ 0.66
LIMK1P53667 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 PRSS44-201ENST00000515154 1146 ntBASIC19.19■□□□□ 0.66
LIMK1P53667 VENTXP5-201ENST00000523979 775 ntBASIC19.19■□□□□ 0.66
LIMK1P53667 AL023803.3-201ENST00000615559 522 ntBASIC19.19■□□□□ 0.66
LIMK1P53667 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LIMK1P53667 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.19■□□□□ 0.66
LIMK1P53667 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LIMK1P53667 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.19■□□□□ 0.66
LIMK1P53667 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK1P53667 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LIMK1P53667 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 YBX1P10-201ENST00000444752 975 ntBASIC19.18■□□□□ 0.66
LIMK1P53667 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 KRT18P16-201ENST00000510337 1294 ntBASIC19.18■□□□□ 0.66
LIMK1P53667 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.18■□□□□ 0.66
LIMK1P53667 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.18■□□□□ 0.66
LIMK1P53667 AC012313.10-201ENST00000623509 926 ntBASIC19.18■□□□□ 0.66
LIMK1P53667 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LIMK1P53667 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
LIMK1P53667 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LIMK1P53667 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.17■□□□□ 0.66
LIMK1P53667 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LIMK1P53667 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms