Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6CP51160 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6CP51160 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.98■□□□□ 0.95
PDE6CP51160 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6CP51160 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.98■□□□□ 0.95
PDE6CP51160 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.98■□□□□ 0.95
PDE6CP51160 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PDE6CP51160 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PDE6CP51160 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.97■□□□□ 0.95
PDE6CP51160 AC093484.2-201ENST00000580996 2166 ntBASIC20.97■□□□□ 0.95
PDE6CP51160 AC087289.5-201ENST00000586076 3175 ntBASIC20.97■□□□□ 0.95
PDE6CP51160 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.97■□□□□ 0.95
PDE6CP51160 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
PDE6CP51160 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PDE6CP51160 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PDE6CP51160 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE6CP51160 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PDE6CP51160 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6CP51160 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.96■□□□□ 0.95
PDE6CP51160 AL121906.2-201ENST00000621597 723 ntBASIC20.96■□□□□ 0.95
PDE6CP51160 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 AL020996.1-203ENST00000536896 2307 ntBASIC20.96■□□□□ 0.95
PDE6CP51160 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6CP51160 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.96■□□□□ 0.95
PDE6CP51160 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PDE6CP51160 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PDE6CP51160 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.96■□□□□ 0.95
PDE6CP51160 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.95■□□□□ 0.95
PDE6CP51160 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE6CP51160 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE6CP51160 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE6CP51160 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE6CP51160 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE6CP51160 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.95■□□□□ 0.94
PDE6CP51160 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE6CP51160 AC124016.1-201ENST00000609552 612 ntBASIC20.95■□□□□ 0.94
PDE6CP51160 AC110285.5-201ENST00000611501 352 ntBASIC20.95■□□□□ 0.94
PDE6CP51160 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.95■□□□□ 0.94
PDE6CP51160 AL023875.1-201ENST00000640777 796 ntBASIC20.95■□□□□ 0.94
PDE6CP51160 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE6CP51160 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
PDE6CP51160 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE6CP51160 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE6CP51160 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6CP51160 AL135905.2-201ENST00000584934 1404 ntBASIC20.95■□□□□ 0.94
PDE6CP51160 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6CP51160 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PDE6CP51160 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6CP51160 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6CP51160 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.94■□□□□ 0.94
PDE6CP51160 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6CP51160 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PDE6CP51160 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6CP51160 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6CP51160 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms