Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LHX2P50458 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 ECEL1P3-201ENST00000427961 737 ntBASIC17.38■□□□□ 0.37
LHX2P50458 AL390955.1-201ENST00000428694 934 ntBASIC17.38■□□□□ 0.37
LHX2P50458 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.38■□□□□ 0.37
LHX2P50458 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.38■□□□□ 0.37
LHX2P50458 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LHX2P50458 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.38■□□□□ 0.37
LHX2P50458 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.38■□□□□ 0.37
LHX2P50458 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.38■□□□□ 0.37
LHX2P50458 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.38■□□□□ 0.37
LHX2P50458 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LHX2P50458 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.37■□□□□ 0.37
LHX2P50458 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LHX2P50458 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.37■□□□□ 0.37
LHX2P50458 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.37■□□□□ 0.37
LHX2P50458 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.37■□□□□ 0.37
LHX2P50458 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LHX2P50458 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.37■□□□□ 0.37
LHX2P50458 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.37■□□□□ 0.37
LHX2P50458 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.37■□□□□ 0.37
LHX2P50458 LINC01023-201ENST00000606054 436 ntBASIC17.37■□□□□ 0.37
LHX2P50458 AP000692.2-201ENST00000608391 879 ntBASIC17.37■□□□□ 0.37
LHX2P50458 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.37■□□□□ 0.37
LHX2P50458 AC133561.5-201ENST00000635547 218 ntBASIC17.37■□□□□ 0.37
LHX2P50458 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 KRT8P9-201ENST00000558927 1449 ntBASIC17.37■□□□□ 0.37
LHX2P50458 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LHX2P50458 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LHX2P50458 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX2P50458 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX2P50458 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX2P50458 AC091390.4-202ENST00000476426 537 ntBASIC17.36■□□□□ 0.37
LHX2P50458 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.36■□□□□ 0.37
LHX2P50458 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX2P50458 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.36■□□□□ 0.37
LHX2P50458 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX2P50458 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LHX2P50458 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.36■□□□□ 0.37
LHX2P50458 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 PCDHAC2-203ENST00000615316 3011 ntBASIC17.36■□□□□ 0.37
LHX2P50458 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX2P50458 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX2P50458 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.36■□□□□ 0.37
LHX2P50458 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX2P50458 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 FAM207BP-201ENST00000447172 505 ntBASIC17.35■□□□□ 0.37
LHX2P50458 AC097488.1-201ENST00000507834 756 ntBASIC17.35■□□□□ 0.37
LHX2P50458 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX2P50458 AP005242.2-201ENST00000580065 1175 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms