Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CENPAP49450 PHGDH-210ENST00000641115 1638 ntBASIC17.58■□□□□ 0.41
CENPAP49450 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
CENPAP49450 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CENPAP49450 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.58■□□□□ 0.41
CENPAP49450 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPAP49450 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CENPAP49450 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPAP49450 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CENPAP49450 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CENPAP49450 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPAP49450 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.58■□□□□ 0.4
CENPAP49450 CDCA4P2-201ENST00000441182 718 ntBASIC17.58■□□□□ 0.4
CENPAP49450 AC133552.2-202ENST00000575694 574 ntBASIC17.58■□□□□ 0.4
CENPAP49450 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.58■□□□□ 0.4
CENPAP49450 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.58■□□□□ 0.4
CENPAP49450 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CENPAP49450 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.57■□□□□ 0.4
CENPAP49450 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 AC005332.7-201ENST00000614046 2005 ntBASIC17.57■□□□□ 0.4
CENPAP49450 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CENPAP49450 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CENPAP49450 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CENPAP49450 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.57■□□□□ 0.4
CENPAP49450 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CENPAP49450 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPAP49450 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CENPAP49450 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CENPAP49450 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 AC006970.2-201ENST00000450065 779 ntBASIC17.56■□□□□ 0.4
CENPAP49450 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.56■□□□□ 0.4
CENPAP49450 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CENPAP49450 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.56■□□□□ 0.4
CENPAP49450 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPAP49450 AC018445.3-201ENST00000624177 1945 ntBASIC17.56■□□□□ 0.4
CENPAP49450 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CENPAP49450 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.56■□□□□ 0.4
CENPAP49450 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CENPAP49450 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CENPAP49450 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.55■□□□□ 0.4
CENPAP49450 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.55■□□□□ 0.4
CENPAP49450 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 AL050303.2-201ENST00000619798 666 ntBASIC17.55■□□□□ 0.4
CENPAP49450 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CENPAP49450 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPAP49450 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPAP49450 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms