Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC1A3P43003 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SLC1A3P43003 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SLC1A3P43003 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC1A3P43003 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SLC1A3P43003 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SLC1A3P43003 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
SLC1A3P43003 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC1A3P43003 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 AL121829.2-201ENST00000620908 328 ntBASIC17.85■□□□□ 0.45
SLC1A3P43003 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.85■□□□□ 0.45
SLC1A3P43003 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
SLC1A3P43003 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SLC1A3P43003 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.84■□□□□ 0.45
SLC1A3P43003 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SLC1A3P43003 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A3P43003 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A3P43003 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SLC1A3P43003 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.84■□□□□ 0.45
SLC1A3P43003 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A3P43003 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.84■□□□□ 0.45
SLC1A3P43003 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.84■□□□□ 0.45
SLC1A3P43003 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SLC1A3P43003 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A3P43003 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A3P43003 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A3P43003 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
SLC1A3P43003 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SLC1A3P43003 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SLC1A3P43003 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.83■□□□□ 0.45
SLC1A3P43003 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A3P43003 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 RNA5SP413-201ENST00000516373 109 ntBASIC17.83■□□□□ 0.44
SLC1A3P43003 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A3P43003 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SLC1A3P43003 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC1A3P43003 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 AC093503.3-201ENST00000624917 2352 ntBASIC17.83■□□□□ 0.44
SLC1A3P43003 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC1A3P43003 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC1A3P43003 AP006587.1-201ENST00000534129 1502 ntBASIC17.82■□□□□ 0.44
SLC1A3P43003 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 POM121L13P-201ENST00000422362 380 ntBASIC17.82■□□□□ 0.44
SLC1A3P43003 KRT18P6-201ENST00000555540 1265 ntBASIC17.82■□□□□ 0.44
SLC1A3P43003 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC1A3P43003 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC1A3P43003 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC1A3P43003 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms