Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRPHP41219 AC104417.2-201ENST00000562989 1793 ntBASIC21.96■■□□□ 1.11
PRPHP41219 AC007952.6-201ENST00000573168 2673 ntBASIC21.96■■□□□ 1.11
PRPHP41219 AC003957.1-201ENST00000625108 2673 ntBASIC21.96■■□□□ 1.11
PRPHP41219 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PRPHP41219 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PRPHP41219 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRPHP41219 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.96■■□□□ 1.11
PRPHP41219 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PRPHP41219 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
PRPHP41219 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRPHP41219 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
PRPHP41219 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PRPHP41219 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PRPHP41219 AC110285.5-201ENST00000611501 352 ntBASIC21.95■■□□□ 1.1
PRPHP41219 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 ITM2C-210ENST00000620962 501 ntBASIC21.95■■□□□ 1.1
PRPHP41219 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRPHP41219 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRPHP41219 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.95■■□□□ 1.1
PRPHP41219 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
PRPHP41219 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
PRPHP41219 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.94■■□□□ 1.1
PRPHP41219 AL032819.2-201ENST00000624543 2162 ntBASIC21.94■■□□□ 1.1
PRPHP41219 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.94■■□□□ 1.1
PRPHP41219 TSPY20P-201ENST00000450910 630 ntBASIC21.94■■□□□ 1.1
PRPHP41219 FAM201B-201ENST00000458407 597 ntBASIC21.94■■□□□ 1.1
PRPHP41219 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.94■■□□□ 1.1
PRPHP41219 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.94■■□□□ 1.1
PRPHP41219 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.94■■□□□ 1.1
PRPHP41219 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.94■■□□□ 1.1
PRPHP41219 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.94■■□□□ 1.1
PRPHP41219 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.94■■□□□ 1.1
PRPHP41219 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PRPHP41219 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.94■■□□□ 1.1
PRPHP41219 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRPHP41219 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.93■■□□□ 1.1
PRPHP41219 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PRPHP41219 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.93■■□□□ 1.1
PRPHP41219 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.93■■□□□ 1.1
PRPHP41219 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PRPHP41219 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.93■■□□□ 1.1
PRPHP41219 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRPHP41219 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.92■■□□□ 1.1
PRPHP41219 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.92■■□□□ 1.1
PRPHP41219 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.92■■□□□ 1.1
PRPHP41219 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.92■■□□□ 1.1
PRPHP41219 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PRPHP41219 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.92■■□□□ 1.1
PRPHP41219 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.92■■□□□ 1.1
PRPHP41219 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.92■■□□□ 1.1
PRPHP41219 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PRPHP41219 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
PRPHP41219 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.92■■□□□ 1.1
PRPHP41219 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRPHP41219 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.92■■□□□ 1.1
PRPHP41219 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.91■■□□□ 1.1
PRPHP41219 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.91■■□□□ 1.1
PRPHP41219 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.91■■□□□ 1.1
PRPHP41219 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRPHP41219 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRPHP41219 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.91■■□□□ 1.1
PRPHP41219 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms