Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.29□□□□□ -0.12
CKS2P33552 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 KRT16P6-202ENST00000425692 1426 ntBASIC14.29□□□□□ -0.12
CKS2P33552 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS2P33552 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CKS2P33552 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.29□□□□□ -0.12
CKS2P33552 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.29□□□□□ -0.12
CKS2P33552 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CKS2P33552 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CKS2P33552 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CKS2P33552 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.28□□□□□ -0.12
CKS2P33552 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CKS2P33552 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.28□□□□□ -0.12
CKS2P33552 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.28□□□□□ -0.12
CKS2P33552 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.28□□□□□ -0.12
CKS2P33552 KRT87P-202ENST00000534226 1464 ntBASIC14.28□□□□□ -0.12
CKS2P33552 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.28□□□□□ -0.12
CKS2P33552 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 AC138907.5-202ENST00000569484 235 ntBASIC14.28□□□□□ -0.12
CKS2P33552 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 AL358852.1-201ENST00000623174 1268 ntBASIC14.28□□□□□ -0.12
CKS2P33552 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 OR6D1P-203ENST00000641209 4860 ntBASIC14.28□□□□□ -0.12
CKS2P33552 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CKS2P33552 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CKS2P33552 AL133373.2-201ENST00000623187 2828 ntBASIC14.28□□□□□ -0.12
CKS2P33552 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CKS2P33552 AL161938.1-201ENST00000569833 2180 ntBASIC14.27□□□□□ -0.12
CKS2P33552 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CKS2P33552 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS2P33552 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS2P33552 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CKS2P33552 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CKS2P33552 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.27□□□□□ -0.12
CKS2P33552 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.27□□□□□ -0.12
CKS2P33552 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CKS2P33552 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.27□□□□□ -0.12
CKS2P33552 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CKS2P33552 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CKS2P33552 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.27□□□□□ -0.12
CKS2P33552 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.27□□□□□ -0.12
CKS2P33552 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.27□□□□□ -0.13
CKS2P33552 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.27□□□□□ -0.13
CKS2P33552 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.27□□□□□ -0.13
CKS2P33552 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.27□□□□□ -0.13
CKS2P33552 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.27□□□□□ -0.13
CKS2P33552 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 AC006333.2-201ENST00000607957 2099 ntBASIC14.27□□□□□ -0.13
CKS2P33552 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CKS2P33552 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CKS2P33552 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms