Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA6P31267 FAAHP1-202ENST00000446499 1238 ntBASIC19.23■□□□□ 0.67
HOXA6P31267 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 RN7SL510P-201ENST00000581311 263 ntBASIC19.23■□□□□ 0.67
HOXA6P31267 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA6P31267 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXA6P31267 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 CLDN5-201ENST00000403084 2357 ntBASIC19.23■□□□□ 0.67
HOXA6P31267 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA6P31267 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXA6P31267 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA6P31267 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA6P31267 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA6P31267 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA6P31267 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA6P31267 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 AC092329.2-201ENST00000598402 547 ntBASIC19.22■□□□□ 0.67
HOXA6P31267 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA6P31267 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HOXA6P31267 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA6P31267 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA6P31267 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA6P31267 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA6P31267 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA6P31267 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA6P31267 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA6P31267 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXA6P31267 AC246785.2-201ENST00000432512 513 ntBASIC19.21■□□□□ 0.67
HOXA6P31267 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA6P31267 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
HOXA6P31267 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HOXA6P31267 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
HOXA6P31267 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.21■□□□□ 0.67
HOXA6P31267 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA6P31267 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 AL645929.1-201ENST00000420084 975 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 KRT17P6-201ENST00000453795 1220 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 AC034232.1-201ENST00000506026 1064 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXA6P31267 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.2■□□□□ 0.66
HOXA6P31267 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 AC111152.3-201ENST00000569699 673 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 AC092119.3-201ENST00000612618 583 ntBASIC19.2■□□□□ 0.66
HOXA6P31267 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXA6P31267 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA6P31267 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HOXA6P31267 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
HOXA6P31267 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA6P31267 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 LINC01465-201ENST00000408887 1940 ntBASIC19.19■□□□□ 0.66
HOXA6P31267 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA6P31267 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA6P31267 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.19■□□□□ 0.66
HOXA6P31267 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXA6P31267 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 AC004870.1-201ENST00000315132 882 ntBASIC19.19■□□□□ 0.66
HOXA6P31267 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA6P31267 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXA6P31267 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXA6P31267 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXA6P31267 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HOXA6P31267 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXA6P31267 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms