Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
APCP25054 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.41■□□□□ 0.22
APCP25054 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
APCP25054 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.41■□□□□ 0.22
APCP25054 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APCP25054 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APCP25054 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.41■□□□□ 0.22
APCP25054 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APCP25054 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.41■□□□□ 0.22
APCP25054 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
APCP25054 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
APCP25054 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.4■□□□□ 0.22
APCP25054 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
APCP25054 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APCP25054 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.4■□□□□ 0.22
APCP25054 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.4■□□□□ 0.22
APCP25054 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
APCP25054 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APCP25054 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.4■□□□□ 0.22
APCP25054 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
APCP25054 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
APCP25054 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.39■□□□□ 0.21
APCP25054 AP002414.4-201ENST00000589764 1148 ntBASIC16.39■□□□□ 0.21
APCP25054 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.39■□□□□ 0.21
APCP25054 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.39■□□□□ 0.21
APCP25054 AP000867.3-201ENST00000524675 377 ntBASIC16.39■□□□□ 0.21
APCP25054 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.39■□□□□ 0.21
APCP25054 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.39■□□□□ 0.21
APCP25054 TPSP2-201ENST00000561760 610 ntBASIC16.39■□□□□ 0.21
APCP25054 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
APCP25054 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
APCP25054 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
APCP25054 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.38■□□□□ 0.21
APCP25054 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.38■□□□□ 0.21
APCP25054 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
APCP25054 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
APCP25054 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.38■□□□□ 0.21
APCP25054 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.38■□□□□ 0.21
APCP25054 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.38■□□□□ 0.21
APCP25054 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.38■□□□□ 0.21
APCP25054 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.38■□□□□ 0.21
APCP25054 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
APCP25054 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.38■□□□□ 0.21
APCP25054 LINC00167-201ENST00000530583 1419 ntBASIC16.37■□□□□ 0.21
APCP25054 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.37■□□□□ 0.21
APCP25054 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 DRAXINP1-201ENST00000437611 948 ntBASIC16.37■□□□□ 0.21
APCP25054 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
APCP25054 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 AL139424.1-201ENST00000607572 797 ntBASIC16.37■□□□□ 0.21
APCP25054 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.37■□□□□ 0.21
APCP25054 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.37■□□□□ 0.21
APCP25054 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
APCP25054 TSPY22P-201ENST00000427496 604 ntBASIC16.37■□□□□ 0.21
APCP25054 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.37■□□□□ 0.21
APCP25054 AL773604.1-201ENST00000617417 272 ntBASIC16.37■□□□□ 0.21
APCP25054 REXO1L6P-202ENST00000619970 1078 ntBASIC16.37■□□□□ 0.21
APCP25054 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.36■□□□□ 0.21
APCP25054 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.36■□□□□ 0.21
APCP25054 AL024507.2-201ENST00000606070 2574 ntBASIC16.36■□□□□ 0.21
APCP25054 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms