Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
SNRPA1P09661 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.79■■□□□ 1.56
SNRPA1P09661 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
SNRPA1P09661 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRPA1P09661 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SNRPA1P09661 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.79■■□□□ 1.56
SNRPA1P09661 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.79■■□□□ 1.56
SNRPA1P09661 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.79■■□□□ 1.56
SNRPA1P09661 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
SNRPA1P09661 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.78■■□□□ 1.56
SNRPA1P09661 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.78■■□□□ 1.56
SNRPA1P09661 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.78■■□□□ 1.56
SNRPA1P09661 AC063952.2-201ENST00000498792 1227 ntBASIC24.78■■□□□ 1.56
SNRPA1P09661 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.78■■□□□ 1.56
SNRPA1P09661 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.78■■□□□ 1.56
SNRPA1P09661 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.78■■□□□ 1.56
SNRPA1P09661 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
SNRPA1P09661 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SNRPA1P09661 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SNRPA1P09661 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.77■■□□□ 1.56
SNRPA1P09661 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.77■■□□□ 1.56
SNRPA1P09661 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.77■■□□□ 1.56
SNRPA1P09661 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.77■■□□□ 1.56
SNRPA1P09661 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.77■■□□□ 1.56
SNRPA1P09661 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SNRPA1P09661 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.77■■□□□ 1.56
SNRPA1P09661 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.77■■□□□ 1.56
SNRPA1P09661 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
SNRPA1P09661 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.77■■□□□ 1.56
SNRPA1P09661 AC139887.4-201ENST00000607877 719 ntBASIC24.77■■□□□ 1.56
SNRPA1P09661 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.77■■□□□ 1.56
SNRPA1P09661 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
SNRPA1P09661 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNRPA1P09661 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.76■■□□□ 1.55
SNRPA1P09661 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.76■■□□□ 1.55
SNRPA1P09661 AC022616.7-201ENST00000525383 220 ntBASIC24.76■■□□□ 1.55
SNRPA1P09661 AC087388.1-201ENST00000571370 1112 ntBASIC24.76■■□□□ 1.55
SNRPA1P09661 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.76■■□□□ 1.55
SNRPA1P09661 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 KRT8P11-201ENST00000409686 1436 ntBASIC24.76■■□□□ 1.55
SNRPA1P09661 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SNRPA1P09661 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.76■■□□□ 1.55
SNRPA1P09661 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRPA1P09661 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.75■■□□□ 1.55
SNRPA1P09661 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SNRPA1P09661 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 AC141257.4-201ENST00000634557 245 ntBASIC24.75■■□□□ 1.55
SNRPA1P09661 AC136944.6-201ENST00000634818 245 ntBASIC24.75■■□□□ 1.55
SNRPA1P09661 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SNRPA1P09661 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.75■■□□□ 1.55
SNRPA1P09661 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC24.75■■□□□ 1.55
SNRPA1P09661 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNRPA1P09661 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms