Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 BX276092.2-201ENST00000417668 665 ntBASIC18.14■□□□□ 0.49
OPN1SWP03999 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.14■□□□□ 0.49
OPN1SWP03999 AC105036.2-201ENST00000569468 176 ntBASIC18.14■□□□□ 0.49
OPN1SWP03999 AC092437.1-201ENST00000624794 1048 ntBASIC18.14■□□□□ 0.49
OPN1SWP03999 AC073111.5-205ENST00000641717 521 ntBASIC18.14■□□□□ 0.49
OPN1SWP03999 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
OPN1SWP03999 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.14■□□□□ 0.49
OPN1SWP03999 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
OPN1SWP03999 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
OPN1SWP03999 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 TEX21P-204ENST00000641479 1693 ntBASIC18.13■□□□□ 0.49
OPN1SWP03999 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.13■□□□□ 0.49
OPN1SWP03999 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.13■□□□□ 0.49
OPN1SWP03999 AC133552.2-202ENST00000575694 574 ntBASIC18.13■□□□□ 0.49
OPN1SWP03999 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.13■□□□□ 0.49
OPN1SWP03999 AC080038.1-201ENST00000611274 1154 ntBASIC18.13■□□□□ 0.49
OPN1SWP03999 IKBKGP1-201ENST00000612193 1073 ntBASIC18.13■□□□□ 0.49
OPN1SWP03999 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.13■□□□□ 0.49
OPN1SWP03999 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.13■□□□□ 0.49
OPN1SWP03999 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
OPN1SWP03999 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.13■□□□□ 0.49
OPN1SWP03999 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
OPN1SWP03999 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
OPN1SWP03999 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.13■□□□□ 0.49
OPN1SWP03999 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
OPN1SWP03999 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
OPN1SWP03999 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
OPN1SWP03999 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
OPN1SWP03999 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.12■□□□□ 0.49
OPN1SWP03999 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.12■□□□□ 0.49
OPN1SWP03999 TFP1-202ENST00000475455 1573 ntBASIC18.12■□□□□ 0.49
OPN1SWP03999 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
OPN1SWP03999 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
OPN1SWP03999 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OPN1SWP03999 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
OPN1SWP03999 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
OPN1SWP03999 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.11■□□□□ 0.49
OPN1SWP03999 MIR663A-201ENST00000385250 93 ntBASIC18.11■□□□□ 0.49
OPN1SWP03999 MIR935-201ENST00000401179 91 ntBASIC18.11■□□□□ 0.49
OPN1SWP03999 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.11■□□□□ 0.49
OPN1SWP03999 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.11■□□□□ 0.49
OPN1SWP03999 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.11■□□□□ 0.49
OPN1SWP03999 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 AF201337.1-201ENST00000520239 748 ntBASIC18.11■□□□□ 0.49
OPN1SWP03999 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.11■□□□□ 0.49
OPN1SWP03999 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.11■□□□□ 0.49
OPN1SWP03999 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.11■□□□□ 0.49
OPN1SWP03999 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.11■□□□□ 0.49
OPN1SWP03999 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
OPN1SWP03999 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
OPN1SWP03999 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
OPN1SWP03999 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
OPN1SWP03999 AC124283.5-201ENST00000624661 1809 ntBASIC18.11■□□□□ 0.49
OPN1SWP03999 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.11■□□□□ 0.49
OPN1SWP03999 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms