Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PROM1O43490 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 TUBB8P6-201ENST00000436895 1288 ntBASIC18.44■□□□□ 0.54
PROM1O43490 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.44■□□□□ 0.54
PROM1O43490 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.44■□□□□ 0.54
PROM1O43490 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.44■□□□□ 0.54
PROM1O43490 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PROM1O43490 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.44■□□□□ 0.54
PROM1O43490 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.44■□□□□ 0.54
PROM1O43490 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.44■□□□□ 0.54
PROM1O43490 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
PROM1O43490 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.44■□□□□ 0.54
PROM1O43490 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PROM1O43490 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PROM1O43490 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.43■□□□□ 0.54
PROM1O43490 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PROM1O43490 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.43■□□□□ 0.54
PROM1O43490 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PROM1O43490 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.43■□□□□ 0.54
PROM1O43490 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PROM1O43490 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PROM1O43490 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 AC087289.5-201ENST00000586076 3175 ntBASIC18.42■□□□□ 0.54
PROM1O43490 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 KRT18P29-201ENST00000397031 1267 ntBASIC18.42■□□□□ 0.54
PROM1O43490 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 AC133681.1-201ENST00000465482 601 ntBASIC18.42■□□□□ 0.54
PROM1O43490 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.42■□□□□ 0.54
PROM1O43490 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 ITM2C-210ENST00000620962 501 ntBASIC18.42■□□□□ 0.54
PROM1O43490 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PROM1O43490 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PROM1O43490 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.42■□□□□ 0.54
PROM1O43490 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PROM1O43490 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PROM1O43490 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PROM1O43490 AC093484.2-201ENST00000580996 2166 ntBASIC18.41■□□□□ 0.54
PROM1O43490 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.41■□□□□ 0.54
PROM1O43490 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.41■□□□□ 0.54
PROM1O43490 KRASP1-201ENST00000407852 552 ntBASIC18.41■□□□□ 0.54
PROM1O43490 AC239809.2-201ENST00000415381 517 ntBASIC18.41■□□□□ 0.54
PROM1O43490 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms