Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 AC112907.2-201ENST00000448639 330 ntBASIC19.03■□□□□ 0.64
C4orf47A7E2U8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.03■□□□□ 0.64
C4orf47A7E2U8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 ZNF444P1-201ENST00000559497 298 ntBASIC19.02■□□□□ 0.64
C4orf47A7E2U8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
C4orf47A7E2U8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
C4orf47A7E2U8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
C4orf47A7E2U8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
C4orf47A7E2U8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 KRT16P6-202ENST00000425692 1426 ntBASIC19.01■□□□□ 0.63
C4orf47A7E2U8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 TSPY21P-201ENST00000433481 731 ntBASIC19.01■□□□□ 0.63
C4orf47A7E2U8 ATP5G2P1-201ENST00000433580 426 ntBASIC19.01■□□□□ 0.63
C4orf47A7E2U8 TSPY23P-201ENST00000440136 739 ntBASIC19.01■□□□□ 0.63
C4orf47A7E2U8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 AL121603.2-201ENST00000557373 2117 ntBASIC19.01■□□□□ 0.63
C4orf47A7E2U8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.01■□□□□ 0.63
C4orf47A7E2U8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 RN7SL510P-201ENST00000581311 263 ntBASIC19■□□□□ 0.63
C4orf47A7E2U8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 AC083849.1-201ENST00000615227 514 ntBASIC19■□□□□ 0.63
C4orf47A7E2U8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19■□□□□ 0.63
C4orf47A7E2U8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
C4orf47A7E2U8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19■□□□□ 0.63
C4orf47A7E2U8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
C4orf47A7E2U8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19■□□□□ 0.63
C4orf47A7E2U8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C4orf47A7E2U8 Z85996.1-201ENST00000494644 937 ntBASIC18.99■□□□□ 0.63
C4orf47A7E2U8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms