Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 GNAS-203ENST00000306120 1878 ntBASIC13.74□□□□□ -0.21
LINC01546A6NGU7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 CYP21A1P-202ENST00000354927 1481 ntBASIC13.74□□□□□ -0.21
LINC01546A6NGU7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01546A6NGU7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.73□□□□□ -0.21
LINC01546A6NGU7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 AC141586.5-201ENST00000624546 2050 ntBASIC13.73□□□□□ -0.21
LINC01546A6NGU7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LINC01546A6NGU7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 YBX1P1-201ENST00000445822 960 ntBASIC13.72□□□□□ -0.21
LINC01546A6NGU7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 AC126763.1-201ENST00000552015 2118 ntBASIC13.72□□□□□ -0.21
LINC01546A6NGU7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01546A6NGU7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 AC099791.1-201ENST00000416440 715 ntBASIC13.71□□□□□ -0.21
LINC01546A6NGU7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 AP001160.3-201ENST00000601484 763 ntBASIC13.71□□□□□ -0.21
LINC01546A6NGU7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
LINC01546A6NGU7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 UBQLN4P1-201ENST00000461599 1801 ntBASIC13.71□□□□□ -0.22
LINC01546A6NGU7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 AC009053.2-201ENST00000563701 2365 ntBASIC13.71□□□□□ -0.22
LINC01546A6NGU7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC01546A6NGU7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms