Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC26.42■■□□□ 1.82
SBNO1A3KN83 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 SPDYE15P-201ENST00000424157 909 ntBASIC26.41■■□□□ 1.82
SBNO1A3KN83 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 IRF5-214ENST00000613821 595 ntTSL 5 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 BX119927.1-201ENST00000636596 1552 ntBASIC26.41■■□□□ 1.82
SBNO1A3KN83 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SBNO1A3KN83 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SBNO1A3KN83 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 LINC01311-201ENST00000565162 1445 ntBASIC26.4■■□□□ 1.82
SBNO1A3KN83 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SBNO1A3KN83 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.4■■□□□ 1.82
SBNO1A3KN83 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SBNO1A3KN83 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SBNO1A3KN83 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SBNO1A3KN83 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.39■■□□□ 1.82
SBNO1A3KN83 GCSHP2-201ENST00000560971 527 ntBASIC26.39■■□□□ 1.82
SBNO1A3KN83 BCL10-202ENST00000620248 774 ntTSL 5 BASIC26.39■■□□□ 1.82
SBNO1A3KN83 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SBNO1A3KN83 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SBNO1A3KN83 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SBNO1A3KN83 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SBNO1A3KN83 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 AC246785.2-201ENST00000432512 513 ntBASIC26.37■■□□□ 1.81
SBNO1A3KN83 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.37■■□□□ 1.81
SBNO1A3KN83 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SBNO1A3KN83 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC26.36■■□□□ 1.81
SBNO1A3KN83 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms