Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CCDC163A0A0D9SF12 AL117328.2-201ENST00000624617 1940 ntBASIC19.27■□□□□ 0.67
CCDC163A0A0D9SF12 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC163A0A0D9SF12 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.27■□□□□ 0.67
CCDC163A0A0D9SF12 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC163A0A0D9SF12 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC163A0A0D9SF12 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC163A0A0D9SF12 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 GCSHP2-201ENST00000560971 527 ntBASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC163A0A0D9SF12 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 NPAP1P7-201ENST00000613027 823 ntBASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC163A0A0D9SF12 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 BX119927.1-201ENST00000636596 1552 ntBASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC163A0A0D9SF12 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC163A0A0D9SF12 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms