Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 FAM86EP-206ENST00000510506 987 ntBASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC187A0A096LP49 IER3-202ENST00000376377 1350 ntBASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 AL671277.2-201ENST00000458060 996 ntBASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 AL359075.1-203ENST00000462729 1002 ntBASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
CCDC187A0A096LP49 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 CKBP1-201ENST00000565489 1086 ntBASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 AL023973.1-201ENST00000624619 620 ntBASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC187A0A096LP49 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 KRT18P48-201ENST00000434763 852 ntBASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AP003041.3-201ENST00000527151 707 ntBASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 KRT126P-201ENST00000549467 1181 ntBASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AL441883.1-201ENST00000566170 1045 ntBASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC187A0A096LP49 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC187A0A096LP49 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 AP000523.1-201ENST00000398242 1049 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms