Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SNORD116.1-201ENST00000365628 92 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-1300P-201ENST00000391046 108 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 PPIAP9-201ENST00000403866 498 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 GPS2P1-201ENST00000411761 986 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 BMS1P13-201ENST00000417301 885 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC010099.3-201ENST00000423896 409 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SRSF1P1-201ENST00000424058 520 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 CETN4P-201ENST00000432407 469 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 RAB11AP1-201ENST00000442978 646 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AL672138.1-201ENST00000450604 1015 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 OR52E3P-201ENST00000452083 936 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 USP9YP25-201ENST00000457708 443 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC026348.1-201ENST00000462549 1053 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC104971.1-201ENST00000495117 578 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC011352.3-201ENST00000505162 593 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC008638.1-201ENST00000506035 866 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 MTCYBP16-201ENST00000509187 1129 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SCARNA16.4-201ENST00000516956 187 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC087808.1-201ENST00000520501 361 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC063949.1-201ENST00000552900 865 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AL049779.2-201ENST00000553847 315 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC127381.1-201ENST00000555979 939 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 BNIP3P26-201ENST00000600827 554 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AC097478.2-201ENST00000610572 514 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SDR42E1P1-201ENST00000611327 477 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 MTND4P8-201ENST00000514997 1362 ntBASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RN7SKP74-201ENST00000362849 309 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-582P-201ENST00000362989 107 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 U3.7-201ENST00000363668 216 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-115P-201ENST00000364310 107 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-444P-201ENST00000383988 108 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RNA5SP339-201ENST00000390987 122 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AF228730.1-201ENST00000397972 663 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL133264.1-201ENST00000407157 562 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AL358176.3-201ENST00000420757 454 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC005005.2-201ENST00000420779 380 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 MTCO2P25-201ENST00000447065 681 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 MYO5BP2-201ENST00000449815 1277 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RPS15AP1-201ENST00000457423 391 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RN7SL799P-201ENST00000475891 298 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC105233.1-201ENST00000498840 781 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 PGAM1P13-201ENST00000507497 754 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 HMGB1P44-201ENST00000508597 572 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-885P-201ENST00000516607 104 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 OR5M2P-201ENST00000529003 936 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 OR4A43P-201ENST00000532938 908 ntBASIC6.03□□□□□ -1.44
COL4A3BPQ9Y5P4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms