Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC104837.1-201ENST00000444644 1587 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 OR1S2-201ENST00000302592 978 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 SNORA51.1-201ENST00000363243 140 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RNA5SP105-201ENST00000391123 113 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RPS12P24-201ENST00000412619 387 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 MTND4LP17-201ENST00000414607 293 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC104837.2-201ENST00000427236 424 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 TRGVB-201ENST00000453257 471 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AL645937.3-201ENST00000453647 936 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RNU7-63P-201ENST00000459054 62 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RN7SL870P-201ENST00000460111 296 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RN7SL214P-201ENST00000487317 265 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 RNA5SP206-201ENST00000516703 121 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AP003072.2-201ENST00000527756 676 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AL080312.2-201ENST00000613001 630 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AL354950.2-201ENST00000617939 290 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.03□□□□□ -0.96
PHF8Q9UPP1 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.03□□□□□ -0.96
PHF8Q9UPP1 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PHF8Q9UPP1 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
PHF8Q9UPP1 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC9.02□□□□□ -0.96
PHF8Q9UPP1 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
PHF8Q9UPP1 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
PHF8Q9UPP1 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 Y_RNA.148-201ENST00000363557 117 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 Y_RNA.255-201ENST00000364581 97 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RN7SKP69-201ENST00000365390 305 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 Y_RNA.557-201ENST00000384680 107 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AL359634.1-202ENST00000404721 284 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AL136133.1-201ENST00000413694 376 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC127526.1-201ENST00000417526 366 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC092634.6-201ENST00000418558 192 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RPS3P2-201ENST00000421346 701 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RPL7AP14-201ENST00000424041 802 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC094019.1-201ENST00000434678 472 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 CRYGGP-201ENST00000443337 145 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 YWHAEP1-201ENST00000453697 763 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC233702.1-201ENST00000482905 502 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC073610.1-201ENST00000489971 396 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RNU6-764P-201ENST00000516396 105 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RN7SKP295-201ENST00000517264 153 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AL389895.1-201ENST00000554127 252 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RN7SL208P-201ENST00000577964 296 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AL008723.3-201ENST00000608926 449 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AC243773.3-201ENST00000613270 256 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AL359757.2-201ENST00000624309 274 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC9.02□□□□□ -0.97
PHF8Q9UPP1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
PHF8Q9UPP1 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms