Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 AC025594.3-201ENST00000613068 790 ntBASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 AL031667.3-201ENST00000620124 655 ntBASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 AL160394.1-201ENST00000624765 724 ntBASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 AC109446.4-201ENST00000623235 2755 ntBASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 MFSD8-219ENST00000641228 2559 ntBASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.96□□□□□ -1.46
PPARGC1AQ9UBK2 AC114774.1-201ENST00000507410 1770 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL357752.1-201ENST00000412817 349 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 MTND4LP11-201ENST00000422184 280 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 GAPDHP48-201ENST00000436626 961 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC139365.2-201ENST00000517972 253 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC096996.1-201ENST00000563813 325 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 ROCK1P1-201ENST00000573767 549 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 RN7SL544P-201ENST00000617232 284 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 RNA5SP439-201ENST00000617595 124 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 RN7SL763P-201ENST00000620922 284 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 AC093775.1-201ENST00000624154 1868 ntBASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PPARGC1AQ9UBK2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 Z95114.1-201ENST00000624264 14574 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AL121657.1-201ENST00000327215 531 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 U3.28-201ENST00000391249 210 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 RN7SKP279-201ENST00000411383 298 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 TPMTP3-201ENST00000411928 735 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 OR51A3P-201ENST00000413596 924 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AL161449.1-201ENST00000414531 1199 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 MRPS21P2-201ENST00000424704 264 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 RPL23AP19-201ENST00000436229 369 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AL137845.2-201ENST00000444292 988 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 OR7E116P-201ENST00000448529 957 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AL133244.1-201ENST00000456007 258 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC022215.1-201ENST00000481770 362 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC011825.1-201ENST00000484967 388 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 PDCL3P4-201ENST00000489621 720 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC009120.1-201ENST00000493458 473 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC104685.1-201ENST00000502445 371 ntBASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.94□□□□□ -1.46
PPARGC1AQ9UBK2 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms