Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 QTRT1P1-201ENST00000604344 1078 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD7Q9P2D1 AC093297.3-201ENST00000607056 2517 ntBASIC4.21□□□□□ -1.73
CHD7Q9P2D1 AC023632.6-201ENST00000624338 2177 ntBASIC4.21□□□□□ -1.73
CHD7Q9P2D1 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 CYCSP4-201ENST00000429682 331 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 VN1R32P-201ENST00000452234 905 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC090013.1-201ENST00000485147 480 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC069304.1-201ENST00000491593 704 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC011755.1-201ENST00000623763 2049 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 Y_RNA.500-201ENST00000384466 111 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 MIR4660-201ENST00000583549 74 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AC091167.4-201ENST00000605079 184 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.21□□□□□ -1.74
CHD7Q9P2D1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CHD7Q9P2D1 AP004289.2-201ENST00000444413 1457 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AF001550.2-201ENST00000636643 217 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 MIR128-1-201ENST00000384921 82 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 MIR1251-201ENST00000408552 70 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 MIR1911-201ENST00000410783 80 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 FCF1P7-201ENST00000451185 558 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC010680.3-201ENST00000604215 520 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC006077.1-201ENST00000604746 343 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC091905.2-201ENST00000623143 306 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 HNRNPA1P54-201ENST00000411857 9714 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AL078604.1-201ENST00000404609 466 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 SNORA3.3-201ENST00000408712 125 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 TCEA1P2-201ENST00000420496 906 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC083863.1-201ENST00000438811 231 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AP001486.1-201ENST00000463339 476 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC018635.1-201ENST00000468292 1030 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC027176.2-201ENST00000559166 746 ntBASIC4.2□□□□□ -1.74
CHD7Q9P2D1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHD7Q9P2D1 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 RNA5SP399-201ENST00000364003 117 ntBASIC4.19□□□□□ -1.74
CHD7Q9P2D1 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
CHD7Q9P2D1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
CHD7Q9P2D1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 DEFB109D-201ENST00000529497 240 ntBASIC4.19□□□□□ -1.74
CHD7Q9P2D1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.19□□□□□ -1.74
CHD7Q9P2D1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms