Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC88CQ9P219 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AL161909.1-201ENST00000397390 712 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 CDY14P-201ENST00000431260 1014 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 CDY12P-201ENST00000440679 1015 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 ARL4AP3-201ENST00000441452 574 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 CDY13P-201ENST00000445813 1015 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 CDY23P-201ENST00000451661 1014 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC012158.1-204ENST00000483430 465 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 TPT1P3-201ENST00000492841 512 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AL139254.3-201ENST00000641097 674 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 RHOT1P2-201ENST00000366423 333 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 PDSS1P1-201ENST00000422953 1114 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 HSPE1P27-201ENST00000430808 296 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 BTF3P10-201ENST00000433415 495 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 RPS26P24-201ENST00000497656 331 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 ATP1B1P1-201ENST00000509767 915 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC010476.1-201ENST00000519111 851 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC084783.1-201ENST00000565846 910 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 MTND6P33-201ENST00000571794 183 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC007546.1-201ENST00000619452 559 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 EIF2AP4-201ENST00000424793 1781 ntBASIC4.07□□□□□ -1.76
CCDC88CQ9P219 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC88CQ9P219 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 ZNF962P-201ENST00000443465 3140 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 BMS1P3-201ENST00000372011 932 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AL356968.2-201ENST00000412769 1257 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 CYCSP10-201ENST00000417973 294 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC010469.1-201ENST00000463864 576 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 RN7SL812P-201ENST00000493791 279 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 RNU1-45P-201ENST00000517191 141 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 UBTFL9-201ENST00000534504 1148 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC113403.1-201ENST00000604910 193 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AL109618.2-201ENST00000605527 211 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC139713.2-215ENST00000641428 5037 ntBASIC4.06□□□□□ -1.76
CCDC88CQ9P219 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC88CQ9P219 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 RNU1-15P-201ENST00000353977 144 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 RNU1-108P-201ENST00000362556 161 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 MIR513A2-201ENST00000385249 127 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL080315.1-201ENST00000406055 466 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 MFSD13B-201ENST00000420133 1290 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 YWHAEP5-201ENST00000431545 765 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC139783.2-201ENST00000504847 1145 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL392048.1-201ENST00000613946 534 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 SNX18P1Y-201ENST00000616231 511 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC091905.2-201ENST00000623143 306 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AC016717.3-201ENST00000624730 554 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 MTCO1P46-201ENST00000451639 1491 ntBASIC4.05□□□□□ -1.76
CCDC88CQ9P219 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC88CQ9P219 AL035696.2-201ENST00000407941 709 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms