Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 AC069061.3-201ENST00000582254 823 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 AC100847.1-201ENST00000611316 481 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 AC002044.3-201ENST00000623314 541 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 OR52H1-202ENST00000641796 1061 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 SCN1A-220ENST00000641603 12506 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 OR56B2P-202ENST00000641377 2453 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 DHX9P1-201ENST00000436565 3076 ntBASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF3Q9HD45 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 OR51H2P-202ENST00000641424 3046 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 RNU6-532P-201ENST00000384318 107 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AP000580.1-201ENST00000404439 358 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL591848.1-201ENST00000413092 322 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC234779.1-201ENST00000425910 285 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC092162.1-201ENST00000432828 434 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC097523.2-201ENST00000435551 652 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 RHEBP2-201ENST00000450289 600 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 OR7L1P-201ENST00000456181 380 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 PSMC1P13-201ENST00000458195 985 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL161747.1-201ENST00000480068 358 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 RNU6-709P-201ENST00000517257 104 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AP001781.1-201ENST00000530977 207 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC022884.3-201ENST00000579571 248 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC020910.2-201ENST00000603635 610 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC005191.1-201ENST00000603950 358 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL391834.1-201ENST00000609609 560 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC005962.2-201ENST00000611427 652 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL049536.1-201ENST00000625043 744 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 OR51C1P-202ENST00000641159 1444 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 AL118496.1-201ENST00000440201 1812 ntBASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF3Q9HD45 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 SALL4P2-201ENST00000423288 2910 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 RNU6-666P-201ENST00000363499 107 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 NPM1P24-201ENST00000428039 894 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AL451139.1-201ENST00000434718 346 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 NMNAT1P2-201ENST00000435192 860 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 MRPL48P1-201ENST00000445390 636 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC073587.1-201ENST00000447093 876 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC079168.2-201ENST00000453977 416 ntBASIC4.68□□□□□ -1.66
TM9SF3Q9HD45 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms