Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BCORP1-203ENST00000513194 5093 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 HMGB1P5-201ENST00000255320 642 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 SNORA21-201ENST00000362423 132 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 SNORD1C-201ENST00000363315 78 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RPS3AP23-201ENST00000401762 784 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 SNRPEP6-201ENST00000407465 277 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP56-201ENST00000410513 331 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC092745.2-202ENST00000411880 369 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL354868.1-201ENST00000417077 482 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC245054.1-201ENST00000420944 258 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC233728.2-201ENST00000425348 757 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC130360.1-201ENST00000425489 1117 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RAB11AP1-201ENST00000442978 646 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 FDX1P2-201ENST00000450769 375 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC016027.4-201ENST00000450866 277 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC146507.1-201ENST00000468335 354 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC117394.1-201ENST00000477323 567 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 VPS26AP1-201ENST00000483197 979 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP288-201ENST00000516227 268 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP238-201ENST00000516483 249 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC008429.4-201ENST00000521201 182 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 OR5AK1P-201ENST00000524837 922 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC130365.2-201ENST00000525882 1201 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC091304.9-201ENST00000612091 226 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 RNA5SP439-201ENST00000617595 124 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 FAM27E2-201ENST00000619668 403 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC000095.2-202ENST00000637415 154 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 OR52B5P-202ENST00000641118 1110 ntBASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SEC61A2Q9H9S3 AC008627.1-201ENST00000517511 1704 ntBASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 NSRP1P1-201ENST00000444067 1693 ntBASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.34□□□□□ -1.56
SEC61A2Q9H9S3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 CAP1P2-201ENST00000417455 1409 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 AC135352.1-201ENST00000506173 1418 ntBASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SEC61A2Q9H9S3 OR56A4-201ENST00000330728 1209 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms