Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 RNU1-44P-201ENST00000384453 163 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 MIR550A3-201ENST00000390735 95 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 RNU6-244P-201ENST00000391028 104 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP397-201ENST00000391323 118 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC006455.6-201ENST00000426192 893 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 RNF19BPX-201ENST00000426224 625 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 MTCYBP12-201ENST00000440559 1134 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AL627224.1-201ENST00000448334 444 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC239809.1-201ENST00000450470 217 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 VN1R32P-201ENST00000452234 905 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AP005119.2-201ENST00000579735 1105 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC090181.2-201ENST00000602975 672 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC009318.3-201ENST00000616916 503 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AL049555.1-201ENST00000562834 1933 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 AC074029.4-201ENST00000624796 1859 ntBASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
LRRC40Q9H9A6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AL359715.4-201ENST00000606629 1436 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RNA5SP22-201ENST00000365393 109 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPS24P12-201ENST00000402084 394 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RN7SKP106-201ENST00000410832 272 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AL590762.4-201ENST00000425885 253 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPS12P10-201ENST00000427031 377 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 NPM1P24-201ENST00000428039 894 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPL36AP15-201ENST00000444514 266 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPS27AP15-201ENST00000447672 466 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC012671.1-201ENST00000451912 203 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RPL7AP28-201ENST00000464513 571 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC092905.1-201ENST00000467527 949 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RN7SL826P-201ENST00000479724 288 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC008897.1-201ENST00000494006 347 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 VTA1P2-201ENST00000520205 911 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC090819.1-201ENST00000523800 1111 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC008083.2-201ENST00000546707 476 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 RN7SL690P-201ENST00000582087 240 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC010201.1-201ENST00000605051 540 ntBASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
LRRC40Q9H9A6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms