Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.96□□□□□ -1.45
CCDC7Q96M83 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC7Q96M83 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CCDC7Q96M83 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC7Q96M83 AL158163.1-201ENST00000603915 1649 ntBASIC5.96□□□□□ -1.46
CCDC7Q96M83 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC7Q96M83 AC092435.4-201ENST00000623012 4159 ntBASIC5.96□□□□□ -1.46
CCDC7Q96M83 AC006971.1-201ENST00000407916 4486 ntBASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 RN7SKP235-201ENST00000410662 305 ntBASIC5.95□□□□□ -1.46
CCDC7Q96M83 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC010374.1-201ENST00000503762 1237 ntBASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 MIR8059-201ENST00000620427 81 ntBASIC5.95□□□□□ -1.46
CCDC7Q96M83 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC7Q96M83 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC7Q96M83 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC7Q96M83 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC7Q96M83 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC7Q96M83 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 GSTM3P2-201ENST00000412746 530 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 RAB9AP4-201ENST00000415230 609 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 RPS26P28-201ENST00000470806 348 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 RPL35P6-201ENST00000490024 372 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 MTCO1P49-201ENST00000523429 802 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC025175.1-201ENST00000606482 759 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC064801.1-201ENST00000612025 407 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC006133.1-201ENST00000617106 264 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 LARP1BP1-201ENST00000506036 1359 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 AC005261.6-201ENST00000623072 1387 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC7Q96M83 AP001284.1-201ENST00000528393 2118 ntBASIC5.94□□□□□ -1.46
CCDC7Q96M83 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC7Q96M83 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RNU1-14P-201ENST00000362759 152 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RPS23P10-201ENST00000416185 486 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 REREP1Y-201ENST00000422655 198 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 REREP2Y-201ENST00000439103 200 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RPL21P6-201ENST00000479171 504 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 BNIP3P41-201ENST00000503774 571 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 STMN1P2-201ENST00000508435 439 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC027176.2-201ENST00000559166 746 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 CYP1D1P-201ENST00000416662 1433 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC7Q96M83 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 MIR372-201ENST00000362225 67 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL161909.1-201ENST00000397390 712 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RPS27AP11-201ENST00000402798 447 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL139039.2-201ENST00000407436 479 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 RNU6-628P-201ENST00000410675 107 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL451062.2-201ENST00000427515 271 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 BTF3P10-201ENST00000433415 495 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC7Q96M83 AL132838.2-201ENST00000492041 314 ntBASIC5.93□□□□□ -1.46
CCDC7Q96M83 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms