Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 ELL2P4-201ENST00000446870 1376 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC122713.2-201ENST00000624942 3335 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC109780.1-201ENST00000451768 1344 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC061975.7-201ENST00000592016 2692 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AP001157.1-201ENST00000550837 2339 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RNU5E-8P-201ENST00000363502 116 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RNU6-379P-201ENST00000363813 104 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 Y_RNA.257-201ENST00000364596 102 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 MIR548F4-201ENST00000408515 105 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OR9R1P-201ENST00000412200 877 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AL663061.1-201ENST00000416625 580 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RPL7P44-201ENST00000424827 742 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RPL35AP12-201ENST00000425362 338 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC003989.1-201ENST00000434569 565 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RPS25P9-201ENST00000435591 252 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 MTND6P18-201ENST00000439477 513 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 CRYGGP-201ENST00000443337 145 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 CXCR2P1-202ENST00000443392 1074 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RPS7P6-201ENST00000485777 579 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC034159.1-201ENST00000513885 583 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RNU6-388P-201ENST00000517012 105 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 RNU6-389P-201ENST00000517048 105 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC138832.1-201ENST00000522871 556 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC036111.2-201ENST00000533247 901 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC005832.3-201ENST00000537929 631 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OR6C73P-201ENST00000546432 358 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 MIR4701-201ENST00000583094 63 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC005357.1-201ENST00000588399 301 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AP001542.2-201ENST00000593141 364 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC009597.2-201ENST00000604659 592 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AL627309.6-201ENST00000606857 840 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AL512624.1-201ENST00000613638 469 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 OR1N1-202ENST00000619659 939 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 PABPC1P8-201ENST00000452851 2086 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
TRIM47Q96LD4 AC096992.2-201ENST00000609553 1684 ntBASIC7.54□□□□□ -1.2
TRIM47Q96LD4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RNY3P3-201ENST00000363816 102 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 Y_RNA.311-201ENST00000365068 96 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RNU5E-5P-201ENST00000365379 116 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 Y_RNA.387-201ENST00000383918 102 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AL157702.1-201ENST00000398764 426 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RN7SKP144-201ENST00000411108 279 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AL713922.1-201ENST00000416477 747 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC239367.3-201ENST00000428996 814 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 DEFA9P-201ENST00000433042 285 ntBASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.53□□□□□ -1.2
TRIM47Q96LD4 RPL19P11-201ENST00000495944 589 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms