Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 RNU6-374P-201ENST00000364146 108 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 HMGN1P20-201ENST00000411849 300 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AL354890.1-201ENST00000413730 346 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AIMP1P1-201ENST00000418670 937 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 RPL36P18-201ENST00000419316 318 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC007562.1-201ENST00000421819 517 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AL358176.2-201ENST00000425769 204 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AL451074.3-201ENST00000437709 472 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC023274.2-201ENST00000445264 521 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC112187.1-201ENST00000455837 479 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 RN7SL269P-201ENST00000467795 305 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC087312.1-201ENST00000471411 480 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC114728.1-201ENST00000488289 483 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC109445.1-201ENST00000512356 383 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 SCARNA18.1-201ENST00000516330 83 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC105029.1-201ENST00000520250 669 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 ARL2BPP5-201ENST00000523141 481 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 OR4C2P-201ENST00000530855 1064 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC068305.2-201ENST00000550567 1205 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC119403.2-201ENST00000590960 598 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 VN1R80P-201ENST00000597126 338 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 MIR6793-201ENST00000612376 63 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 AC015908.5-201ENST00000623289 343 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 MFSD8-245ENST00000641743 948 ntBASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.12□□□□□ -1.27
NEDD1Q8NHV4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RNU6-483P-201ENST00000384088 108 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RNU6-767P-201ENST00000384132 107 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 OR7E101P-201ENST00000400428 513 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 Y_RNA.605-201ENST00000410577 105 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RSU1P3-201ENST00000412878 835 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 ZNF90P2-204ENST00000419323 1075 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 SETP9-201ENST00000423837 832 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC245884.2-201ENST00000426257 404 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 HSPE1P28-201ENST00000443139 211 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC073072.2-201ENST00000447425 348 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 HLA-DPA3-207ENST00000454398 229 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RNU6-430P-201ENST00000517078 107 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 AC093788.1-201ENST00000609356 927 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 MLECP1-201ENST00000615893 709 ntBASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
NEDD1Q8NHV4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms