Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ELOCP8-201ENST00000439309 332 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 FGF7P5-201ENST00000441829 291 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 ELOCP15-201ENST00000442090 332 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SEPT14P24-201ENST00000447236 180 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC234781.3-201ENST00000452540 973 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RPL7P32-201ENST00000457119 744 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC099560.2-201ENST00000457554 255 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 IGLV3-24-201ENST00000517477 197 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 IGKV2-36-201ENST00000519999 223 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 COX6B1P6-201ENST00000522347 255 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AGGF1P4-201ENST00000568249 801 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 ZNF415P1-201ENST00000582279 1166 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 RN7SL622P-201ENST00000585292 275 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 OR7E18P-201ENST00000592589 702 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC063977.5-201ENST00000601044 974 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AL020997.3-201ENST00000602843 359 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC016877.3-201ENST00000606778 504 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AP003392.5-201ENST00000607857 415 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AL355816.1-201ENST00000607951 118 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC243654.2-201ENST00000612843 443 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC015540.1-201ENST00000615828 501 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC023509.5-201ENST00000617434 807 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AL121890.3-201ENST00000618494 516 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC079248.2-201ENST00000623779 326 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 CDRT1-208ENST00000630868 794 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 AC139713.2-210ENST00000641741 992 ntBASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SIMC1Q8NDZ2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC005832.2-201ENST00000538921 1430 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC022031.1-201ENST00000585985 2593 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 NSRP1P1-201ENST00000444067 1693 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 FAM133CP-201ENST00000332869 704 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 RN7SKP185-201ENST00000362813 326 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 U3.25-201ENST00000391209 220 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 MIR1303-201ENST00000408625 86 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 RN7SKP293-201ENST00000411389 296 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC096921.1-201ENST00000411661 375 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC092638.1-201ENST00000411966 1275 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AL596448.1-201ENST00000415024 392 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 BX510359.3-201ENST00000422168 306 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 SUMO2P3-201ENST00000438311 288 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 HMGB3P6-201ENST00000444896 598 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 AL929288.2-201ENST00000446368 407 ntBASIC5.32□□□□□ -1.56
SIMC1Q8NDZ2 CBX1P2-201ENST00000453841 458 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms