Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC093770.1-201ENST00000511559 571 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AP001160.4-201ENST00000596971 382 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC040174.2-201ENST00000602701 465 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC103792.1-201ENST00000603591 919 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC009237.17-201ENST00000618111 748 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 MIR7641-1-201ENST00000627518 61 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 AC017002.4-201ENST00000604721 1525 ntBASIC4.16□□□□□ -1.74
C9orf40Q8IXQ3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 NXPH1-205ENST00000602349 1953 ntBASIC4.15□□□□□ -1.74
C9orf40Q8IXQ3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 RNA5SP447-201ENST00000363749 119 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 RNU1-130P-201ENST00000363930 160 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 RNU1-63P-201ENST00000383902 164 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 RPL23AP59-201ENST00000399415 461 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 FAR2P2-201ENST00000413041 594 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 TMSB10P2-201ENST00000416049 131 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC004690.1-201ENST00000418216 328 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC009480.2-201ENST00000422916 432 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 FAR2P4-202ENST00000425399 584 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 MTATP6P11-201ENST00000428071 670 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AL353898.1-201ENST00000444055 238 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 MTND2P25-201ENST00000449028 610 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC012671.1-201ENST00000451912 203 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 NIP7P2-201ENST00000485801 544 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 DEFB109F-201ENST00000491870 277 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 HMGB1P3-201ENST00000502802 616 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC068831.4-201ENST00000556118 109 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 HMGB2P1-201ENST00000591146 634 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 RPL26P30-202ENST00000602923 645 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC084373.1-201ENST00000603311 235 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC008966.2-201ENST00000606157 453 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AL356490.1-201ENST00000623079 479 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC073592.7-201ENST00000623659 507 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC006065.6-201ENST00000625201 545 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC139713.2-214ENST00000642059 1811 ntBASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
C9orf40Q8IXQ3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 HSPD1P14-201ENST00000432666 1618 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AC110792.3-201ENST00000595906 1614 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 IGKV7-3-201ENST00000357453 298 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 LAP3P1-201ENST00000403648 294 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 RPL5P19-201ENST00000404228 893 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 USP9YP19-201ENST00000412165 485 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 SNRPFP1-201ENST00000414761 252 ntBASIC4.14□□□□□ -1.75
C9orf40Q8IXQ3 AL356387.2-201ENST00000422272 243 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms