Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 MIR298-201ENST00000401212 88 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 RPL5P19-201ENST00000404228 893 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ZNF603P-201ENST00000405613 487 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 RPS20P14-201ENST00000412545 360 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC007064.3-201ENST00000422608 359 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 MTND2P11-201ENST00000423638 648 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 GSTA7P-201ENST00000438425 448 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ELOCP8-201ENST00000439309 332 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ELOCP15-201ENST00000442090 332 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 C1DP3-201ENST00000455013 423 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 RPL32P9-201ENST00000487963 407 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 RNA5SP497-201ENST00000516081 97 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 UBTFL9-201ENST00000534504 1148 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AP006289.1-201ENST00000538089 277 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 PDCD5P1-201ENST00000543528 309 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 BNIP3P32-201ENST00000600015 554 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AL356489.2-201ENST00000566968 3528 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 AC016588.2-201ENST00000632484 3021 ntBASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC50Q8IVM0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RN7SKP106-201ENST00000410832 272 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC073335.1-201ENST00000427776 363 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC073648.4-201ENST00000442655 781 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RN7SL329P-201ENST00000467740 299 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RPL12P20-201ENST00000475538 479 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RN7SL809P-201ENST00000482040 297 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC083982.1-201ENST00000485679 344 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RN7SL205P-201ENST00000490174 284 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC011005.3-201ENST00000491624 395 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 RNA5SP228-201ENST00000516232 133 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 MTND2P13-201ENST00000577438 1039 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AL021707.7-201ENST00000607991 416 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 OR2L1P-202ENST00000641567 1023 ntBASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC50Q8IVM0 AC018555.1-201ENST00000567548 1980 ntBASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 MAPK10-304ENST00000641341 3984 ntBASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 AC107027.3-201ENST00000565095 3473 ntBASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC50Q8IVM0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 MIR365B-201ENST00000362317 111 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 RNU6-386P-201ENST00000362650 107 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 RNA5SP307-201ENST00000362863 116 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 MT-RNR1-201ENST00000389680 954 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 SDHCP2-201ENST00000398565 501 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 NPM1P26-201ENST00000426339 738 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 HMGB1P16-201ENST00000447155 540 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 RAB28P3-201ENST00000448325 597 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 RPL31P53-201ENST00000457065 348 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 IGLV2-34-201ENST00000490007 283 ntBASIC4.65□□□□□ -1.67
CCDC50Q8IVM0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms