Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC092170.1-201ENST00000440211 356 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC097463.1-201ENST00000447288 481 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 PDSS1P2-201ENST00000449397 678 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AL133351.3-201ENST00000454998 193 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 snoU13.29-201ENST00000459370 104 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 RPS4XP12-201ENST00000461747 709 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 SNX18P24-201ENST00000505249 671 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 DUTP7-201ENST00000507982 486 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC111000.3-201ENST00000508057 576 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AF235103.2-201ENST00000525753 346 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 PSMB7P1-201ENST00000556349 514 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 BNIP3P22-201ENST00000593399 556 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 COX6CP4-201ENST00000605798 228 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AL590282.1-201ENST00000610379 1136 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC023158.2-201ENST00000614876 543 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC024884.1-201ENST00000620583 399 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 AC005725.1-201ENST00000577346 2607 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 SHQ1P1-201ENST00000437111 1544 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 HSPD1P7-201ENST00000447985 1686 ntBASIC6.49□□□□□ -1.37
RNF43Q68DV7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RNF43Q68DV7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF43Q68DV7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RNU6-501P-201ENST00000364072 100 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RNA5SP178-201ENST00000410380 128 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 RNU6-248P-201ENST00000410720 107 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AIMP1P1-201ENST00000418670 937 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 MTCO1P20-201ENST00000425366 358 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL513185.2-201ENST00000425543 193 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RPL23AP19-201ENST00000436229 369 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AL353898.1-201ENST00000444055 238 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 HMGB1P5-202ENST00000451497 985 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RAD23BP3-201ENST00000454157 1152 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 SNX18P26-201ENST00000458433 740 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC006539.1-201ENST00000481419 501 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC016687.1-201ENST00000482574 353 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 RPS7P6-201ENST00000485777 579 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 MTCYBP43-201ENST00000513621 740 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 RN7SKP35-201ENST00000517210 151 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 MTND1P35-201ENST00000526739 508 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 AC079905.1-201ENST00000549280 475 ntBASIC6.48□□□□□ -1.37
RNF43Q68DV7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF43Q68DV7 PCMTD1P2-201ENST00000565017 355 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms