Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.85□□□□□ -1.15
VARS2Q5ST30 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
VARS2Q5ST30 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
VARS2Q5ST30 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
VARS2Q5ST30 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
VARS2Q5ST30 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 RNU6-1298P-201ENST00000362456 101 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 Y_RNA.83-201ENST00000363005 113 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 RNU6-44P-201ENST00000384045 107 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 Y_RNA.473-201ENST00000384333 102 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 RNU6-1168P-201ENST00000390831 104 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AP000580.1-201ENST00000404439 358 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AL662791.3-201ENST00000413771 776 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 SYF2P2-201ENST00000417620 583 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AL451139.1-201ENST00000434718 346 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AL161626.1-201ENST00000441480 490 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC005517.1-201ENST00000452091 489 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC090686.1-201ENST00000481577 749 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC092436.1-201ENST00000506450 503 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC074198.2-201ENST00000508153 258 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 SNORA40.15-201ENST00000516884 107 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 IGKV2-38-201ENST00000517443 247 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 EEF1B2P2-201ENST00000519625 676 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC130366.1-201ENST00000526505 1192 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 uc_338.34-201ENST00000617467 174 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 CR381572.1-201ENST00000625098 102 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC006453.3-201ENST00000635891 377 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 AP003471.1-202ENST00000319051 1988 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AC005183.1-201ENST00000603687 1979 ntBASIC7.84□□□□□ -1.15
VARS2Q5ST30 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
VARS2Q5ST30 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
VARS2Q5ST30 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
VARS2Q5ST30 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
VARS2Q5ST30 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL512353.3-201ENST00000417517 1326 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 AC138627.1-203ENST00000641872 1680 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 AL121886.1-201ENST00000358609 435 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 RN7SKP162-201ENST00000363605 345 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 RFX3-203ENST00000381984 364 ntTSL 3 BASIC7.83□□□□□ -1.16
VARS2Q5ST30 Y_RNA.551-201ENST00000384661 102 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 RNU6-959P-201ENST00000384671 107 ntBASIC7.83□□□□□ -1.16
VARS2Q5ST30 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
VARS2Q5ST30 RPL7P60-201ENST00000397636 735 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms