Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MIR600-201ENST00000385007 98 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 SNORA68.2-201ENST00000391263 128 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 OR8V1P-201ENST00000395193 873 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 SNORA11C-201ENST00000408532 129 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 MIR1303-201ENST00000408625 86 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 RNU6-77P-201ENST00000410554 91 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 OR5M12P-201ENST00000423388 929 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 RPS6P15-201ENST00000431996 751 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AL161722.2-201ENST00000434731 981 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC073522.1-201ENST00000483312 377 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC231760.1-201ENST00000498002 260 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC010306.1-201ENST00000523223 1117 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.49□□□□□ -1.69
EFNB3Q15768 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.49□□□□□ -1.69
EFNB3Q15768 OR11J2P-201ENST00000555298 907 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 RN7SL708P-201ENST00000580952 299 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC069366.1-201ENST00000583159 838 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC015688.2-201ENST00000584523 262 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 VN1R83P-201ENST00000595685 445 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC099676.1-201ENST00000608886 657 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 AC092608.3-201ENST00000625017 386 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
EFNB3Q15768 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
EFNB3Q15768 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EFNB3Q15768 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
EFNB3Q15768 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EFNB3Q15768 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
EFNB3Q15768 ZNF876P-202ENST00000398732 1485 ntBASIC4.49□□□□□ -1.69
EFNB3Q15768 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EFNB3Q15768 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.48□□□□□ -1.69
EFNB3Q15768 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
EFNB3Q15768 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EFNB3Q15768 RNF6P1-201ENST00000444889 1784 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 AC046144.1-201ENST00000478559 1853 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
EFNB3Q15768 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.48□□□□□ -1.69
EFNB3Q15768 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EFNB3Q15768 OR52E6-202ENST00000379946 954 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EFNB3Q15768 NCSTNP1-201ENST00000406229 144 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 MIR1182-201ENST00000408363 97 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.48□□□□□ -1.69
EFNB3Q15768 OR4K6P-201ENST00000416478 897 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AC009302.1-201ENST00000417147 390 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 ELOCP9-201ENST00000418624 239 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AL121878.1-201ENST00000418638 859 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 OR6C64P-201ENST00000419708 825 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 DDX39BP1-205ENST00000422507 192 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.48□□□□□ -1.69
EFNB3Q15768 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.48□□□□□ -1.69
EFNB3Q15768 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.48□□□□□ -1.69
EFNB3Q15768 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.48□□□□□ -1.69
EFNB3Q15768 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
EFNB3Q15768 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.48□□□□□ -1.69
EFNB3Q15768 AL450263.2-201ENST00000439400 589 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 PTENP1-201ENST00000447117 1215 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 BX248409.1-201ENST00000455497 255 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.48□□□□□ -1.69
EFNB3Q15768 RPL7AP52-201ENST00000458096 790 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 RPL23AP12-201ENST00000467573 473 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AC097484.1-201ENST00000471148 389 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.48□□□□□ -1.69
EFNB3Q15768 BX284632.1-201ENST00000478218 541 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 RN7SL97P-201ENST00000486780 299 ntBASIC4.48□□□□□ -1.69
EFNB3Q15768 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.48□□□□□ -1.69
EFNB3Q15768 AC006427.1-201ENST00000514359 712 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms