Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 MTND4P31-201ENST00000425607 1343 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 OR4K15-201ENST00000305051 1216 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 RNA5SP223-201ENST00000365174 120 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 MIR122-201ENST00000385044 85 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 DNAJC19P6-201ENST00000401853 280 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 SNORA77-201ENST00000408716 125 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 RPS27AP7-201ENST00000422792 455 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 ARF4P4-201ENST00000439608 520 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AC092170.1-201ENST00000440211 356 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC234781.3-201ENST00000452540 973 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 Z95152.1-201ENST00000453556 656 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.32□□□□□ -1.56
UBE3AQ05086 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 HMGB1P38-201ENST00000490557 577 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AC093720.1-201ENST00000505681 714 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 RNU6-347P-201ENST00000516658 105 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 RN7SKP92-201ENST00000517266 244 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC083923.1-201ENST00000523708 376 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.32□□□□□ -1.56
UBE3AQ05086 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC090330.1-201ENST00000588646 764 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 BNIP3P40-201ENST00000596017 556 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AP002802.2-201ENST00000605877 235 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC099654.9-201ENST00000637055 678 ntBASIC5.32□□□□□ -1.56
UBE3AQ05086 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UBE3AQ05086 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.32□□□□□ -1.56
UBE3AQ05086 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBE3AQ05086 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
UBE3AQ05086 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.32□□□□□ -1.56
UBE3AQ05086 DHX40P1-201ENST00000588725 1412 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3AQ05086 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3AQ05086 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AC068538.1-201ENST00000376856 336 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 SNORA48.4-201ENST00000391089 134 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 SNORA11-201ENST00000408789 128 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AC000041.1-201ENST00000439655 175 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AL359265.1-201ENST00000440296 795 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC099063.2-201ENST00000446360 662 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC012512.1-201ENST00000446594 718 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 BX842559.2-201ENST00000451418 605 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 TRBV8-2-201ENST00000475637 270 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 RPS4XP6-201ENST00000477670 797 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3AQ05086 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.31□□□□□ -1.56
UBE3AQ05086 SUMO2P5-201ENST00000506790 245 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 IGBP1P5-201ENST00000507524 1000 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AC111000.3-201ENST00000508057 576 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC008565.1-201ENST00000509046 885 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC104108.1-201ENST00000509930 412 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 MORF4L1P3-201ENST00000525966 950 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AC009643.1-201ENST00000532030 391 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3AQ05086 AP001880.2-201ENST00000538233 448 ntBASIC5.31□□□□□ -1.56
UBE3AQ05086 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3AQ05086 PARP1P2-201ENST00000556806 195 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms