Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.99□□□□□ -1.77
LMO4P61968 OR5M2P-201ENST00000529003 936 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AC118942.1-201ENST00000529674 1035 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.99□□□□□ -1.77
LMO4P61968 AL132857.1-201ENST00000555180 708 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.99□□□□□ -1.77
LMO4P61968 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.99□□□□□ -1.77
LMO4P61968 MTCYBP28-201ENST00000566728 1132 ntBASIC3.99□□□□□ -1.77
LMO4P61968 MIR5699-201ENST00000578903 90 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.99□□□□□ -1.77
LMO4P61968 AC245036.5-201ENST00000596330 847 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 MTCO3P22-201ENST00000603219 784 ntBASIC3.99□□□□□ -1.77
LMO4P61968 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.99□□□□□ -1.77
LMO4P61968 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AL451086.1-201ENST00000605596 223 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AC019193.2-201ENST00000610012 634 ntBASIC3.99□□□□□ -1.77
LMO4P61968 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.99□□□□□ -1.77
LMO4P61968 AL121890.2-201ENST00000617644 465 ntBASIC3.99□□□□□ -1.77
LMO4P61968 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
LMO4P61968 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.99□□□□□ -1.77
LMO4P61968 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMO4P61968 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.99□□□□□ -1.77
LMO4P61968 MUC2-202ENST00000613187 4845 ntBASIC3.98□□□□□ -1.77
LMO4P61968 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
LMO4P61968 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 AL022311.1-201ENST00000623726 19416 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC011447.7-201ENST00000624228 1590 ntBASIC3.98□□□□□ -1.77
LMO4P61968 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMO4P61968 AL132640.2-201ENST00000559968 1698 ntBASIC3.98□□□□□ -1.77
LMO4P61968 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.98□□□□□ -1.77
LMO4P61968 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 TLK1P1-201ENST00000456760 2440 ntBASIC3.98□□□□□ -1.77
LMO4P61968 OR4K15-201ENST00000305051 1216 ntBASIC3.98□□□□□ -1.77
LMO4P61968 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMO4P61968 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.98□□□□□ -1.77
LMO4P61968 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LMO4P61968 RNU6-532P-201ENST00000384318 107 ntBASIC3.98□□□□□ -1.77
LMO4P61968 RPL21P67-201ENST00000402896 478 ntBASIC3.98□□□□□ -1.77
LMO4P61968 Z86062.1-201ENST00000406773 777 ntBASIC3.98□□□□□ -1.77
LMO4P61968 RN7SKP222-201ENST00000410651 315 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AL136231.1-201ENST00000429407 730 ntBASIC3.98□□□□□ -1.77
LMO4P61968 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 RPL7P34-201ENST00000433316 712 ntBASIC3.98□□□□□ -1.77
LMO4P61968 RPS17P8-201ENST00000434525 335 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC3.98□□□□□ -1.77
LMO4P61968 NPM1P39-201ENST00000449818 867 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 CEACAMP6-201ENST00000452007 574 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AL445669.2-201ENST00000454425 421 ntBASIC3.98□□□□□ -1.77
LMO4P61968 SNORD11.1-201ENST00000459482 85 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMO4P61968 AC073358.1-201ENST00000505671 684 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC111000.3-201ENST00000508057 576 ntBASIC3.98□□□□□ -1.77
LMO4P61968 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO4P61968 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.98□□□□□ -1.77
LMO4P61968 MTCO3P28-201ENST00000513351 515 ntBASIC3.98□□□□□ -1.77
LMO4P61968 RNU2-30P-201ENST00000516209 141 ntBASIC3.98□□□□□ -1.77
LMO4P61968 RNU6-1308P-201ENST00000516817 103 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 C1GALT1P3-201ENST00000522049 819 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.98□□□□□ -1.77
LMO4P61968 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.98□□□□□ -1.77
LMO4P61968 AL110118.1-201ENST00000553543 400 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AC005951.1-201ENST00000576706 485 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 MIR5096-201ENST00000583713 70 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AL365400.2-201ENST00000605604 902 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC026741.1-201ENST00000605892 482 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AL096803.3-201ENST00000609032 532 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AL157392.4-201ENST00000609756 345 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.98□□□□□ -1.77
LMO4P61968 AL645927.2-201ENST00000618350 349 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AP003485.2-201ENST00000623636 610 ntBASIC3.98□□□□□ -1.77
LMO4P61968 AC139792.2-201ENST00000624218 587 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms