Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 RN7SL132P-201ENST00000478131 296 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AC090686.1-201ENST00000481577 749 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AC098799.3-201ENST00000506095 438 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.33□□□□□ -1.72
CLDN6P56747 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN6P56747 CYCSP40-201ENST00000575927 294 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.33□□□□□ -1.72
CLDN6P56747 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CLDN6P56747 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN6P56747 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CLDN6P56747 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CLDN6P56747 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN6P56747 SNORA70.4-201ENST00000365509 134 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 RN7SKP97-201ENST00000410966 333 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN6P56747 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN6P56747 AL117339.2-201ENST00000430475 180 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 RPL23AP52-201ENST00000439311 478 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 AL589765.3-201ENST00000446084 462 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN6P56747 DHFRP3-201ENST00000455595 559 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN6P56747 AL133372.1-201ENST00000493565 745 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN6P56747 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN6P56747 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN6P56747 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 AC015804.1-201ENST00000622935 435 ntBASIC4.32□□□□□ -1.72
CLDN6P56747 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN6P56747 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
CLDN6P56747 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN6P56747 LARP1BP1-201ENST00000506036 1359 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN6P56747 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN6P56747 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN6P56747 MIR208A-201ENST00000362287 71 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 RNA5SP387-201ENST00000364226 106 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 SNORA62.3-201ENST00000365110 153 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 MIR554-201ENST00000384874 96 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AL161909.1-201ENST00000397390 712 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AL136131.1-201ENST00000406079 803 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.31□□□□□ -1.72
CLDN6P56747 HSFY6P-201ENST00000445573 403 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 RPL23AP43-201ENST00000446445 471 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC022431.1-201ENST00000450941 438 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 OR6C72P-201ENST00000451403 892 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN6P56747 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN6P56747 NDUFB4P12-201ENST00000513465 390 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 SNORD116-30-201ENST00000516468 85 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN6P56747 AC011270.1-201ENST00000558606 583 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC090515.3-201ENST00000560431 315 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 SULT1C2P2-201ENST00000562517 294 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 GMCL1P2-201ENST00000605230 823 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN6P56747 MIR6867-201ENST00000610636 67 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 MIR8069-1-201ENST00000616627 86 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 MIR8069-2-201ENST00000621412 86 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC034229.5-201ENST00000624258 185 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 AC090506.2-201ENST00000624521 419 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 MIR492-201ENST00000638676 116 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 AL158163.1-201ENST00000603915 1649 ntBASIC4.31□□□□□ -1.72
CLDN6P56747 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN6P56747 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLDN6P56747 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CLDN6P56747 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.3□□□□□ -1.72
CLDN6P56747 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CLDN6P56747 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms