Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC007996.1-201ENST00000620414 2821 ntBASIC5.17□□□□□ -1.58
HDAC4P56524 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.17□□□□□ -1.58
HDAC4P56524 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.17□□□□□ -1.58
HDAC4P56524 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HDAC4P56524 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.16□□□□□ -1.58
HDAC4P56524 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 LINC01109-201ENST00000603837 3081 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
HDAC4P56524 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.16□□□□□ -1.58
HDAC4P56524 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 RNA5SP305-201ENST00000362665 119 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 RNU4-31P-201ENST00000384211 141 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 MIR1271-201ENST00000408537 86 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 RN7SKP213-201ENST00000410746 298 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 RPL12P3-201ENST00000440080 396 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC092647.3-201ENST00000443044 633 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AL137845.2-201ENST00000444292 988 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 AC093166.2-201ENST00000455969 1017 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 RPS20P4-201ENST00000461659 355 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC108729.1-201ENST00000487812 947 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC004453.1-201ENST00000487895 408 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 TPT1P3-201ENST00000492841 512 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 TRAV31-201ENST00000502780 342 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 ARL4AP1-201ENST00000503220 705 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 RNA5SP392-201ENST00000516905 112 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.16□□□□□ -1.58
HDAC4P56524 AP000916.1-201ENST00000533869 835 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 AC023825.1-201ENST00000566704 1030 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC112503.1-201ENST00000608436 391 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC245100.7-201ENST00000609678 442 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AC011472.4-201ENST00000615848 491 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AL049794.2-201ENST00000616301 365 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 AP004607.9-201ENST00000618202 316 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.16□□□□□ -1.58
HDAC4P56524 AP002799.1-201ENST00000623552 423 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.16□□□□□ -1.58
HDAC4P56524 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HDAC4P56524 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
HDAC4P56524 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.16□□□□□ -1.58
HDAC4P56524 BX005019.1-201ENST00000561881 1810 ntBASIC5.16□□□□□ -1.58
HDAC4P56524 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HDAC4P56524 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
HDAC4P56524 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDAC4P56524 AC009313.2-201ENST00000417893 1941 ntBASIC5.15□□□□□ -1.58
HDAC4P56524 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HDAC4P56524 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC4P56524 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HDAC4P56524 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC4P56524 RNU6-468P-201ENST00000384003 109 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HDAC4P56524 MIR550A3-201ENST00000390735 95 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC4P56524 HMGB3P19-201ENST00000403971 560 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL355615.1-201ENST00000406187 641 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 RNU2-50P-201ENST00000410494 143 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL139128.1-201ENST00000413921 941 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC009302.1-201ENST00000417147 390 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC093162.1-201ENST00000419682 124 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC048351.1-201ENST00000420064 602 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 MTCO2P17-201ENST00000424336 677 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL035458.1-201ENST00000433096 585 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 MTND6P18-201ENST00000439477 513 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC004854.1-201ENST00000440356 349 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.15□□□□□ -1.59
HDAC4P56524 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.15□□□□□ -1.59
HDAC4P56524 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC099063.2-201ENST00000446360 662 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
HDAC4P56524 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.15□□□□□ -1.59
HDAC4P56524 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC104982.1-201ENST00000478775 574 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC4P56524 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC069306.1-201ENST00000507006 843 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.15□□□□□ -1.59
HDAC4P56524 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC110775.1-201ENST00000513721 462 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms