Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC069307.1-201ENST00000602820 447 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC090525.3-201ENST00000605601 189 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
CDH12P55289 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 AL158163.2-201ENST00000619110 700 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AP002782.1-201ENST00000623107 614 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AP002967.1-201ENST00000624203 539 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC079416.3-201ENST00000624479 549 ntBASIC4.71□□□□□ -1.66
CDH12P55289 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.71□□□□□ -1.66
CDH12P55289 AC017037.3-201ENST00000625016 472 ntBASIC4.71□□□□□ -1.66
CDH12P55289 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.71□□□□□ -1.66
CDH12P55289 AC135068.12-201ENST00000637370 931 ntBASIC4.71□□□□□ -1.66
CDH12P55289 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CDH12P55289 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.71□□□□□ -1.66
CDH12P55289 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CDH12P55289 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 AC007996.1-201ENST00000620414 2821 ntBASIC4.7□□□□□ -1.66
CDH12P55289 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.7□□□□□ -1.66
CDH12P55289 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH12P55289 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDH12P55289 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 SNORA2.3-201ENST00000383920 135 ntBASIC4.7□□□□□ -1.66
CDH12P55289 SNORA67-201ENST00000384423 137 ntBASIC4.7□□□□□ -1.66
CDH12P55289 LRRC37BP1-201ENST00000398851 714 ntBASIC4.7□□□□□ -1.66
CDH12P55289 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.7□□□□□ -1.66
CDH12P55289 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH12P55289 AL513325.1-201ENST00000417716 1034 ntBASIC4.7□□□□□ -1.66
CDH12P55289 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.7□□□□□ -1.66
CDH12P55289 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 AC079807.1-201ENST00000429993 481 ntBASIC4.7□□□□□ -1.66
CDH12P55289 MTND5P25-201ENST00000430499 799 ntBASIC4.7□□□□□ -1.66
CDH12P55289 RPL34P6-201ENST00000432390 345 ntBASIC4.7□□□□□ -1.66
CDH12P55289 HMGB1P45-201ENST00000435986 653 ntBASIC4.7□□□□□ -1.66
CDH12P55289 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.7□□□□□ -1.66
CDH12P55289 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 AC144530.1-201ENST00000452862 555 ntBASIC4.7□□□□□ -1.66
CDH12P55289 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 Z92846.1-201ENST00000456203 268 ntBASIC4.7□□□□□ -1.66
CDH12P55289 GYG1P1-201ENST00000460864 698 ntBASIC4.7□□□□□ -1.66
CDH12P55289 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 RPL23AP44-201ENST00000482216 473 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 RNA5SP249-201ENST00000516127 99 ntBASIC4.7□□□□□ -1.66
CDH12P55289 snoZ278.1-201ENST00000517059 112 ntBASIC4.7□□□□□ -1.66
CDH12P55289 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.7□□□□□ -1.66
CDH12P55289 MTND4LP24-201ENST00000572277 291 ntBASIC4.7□□□□□ -1.66
CDH12P55289 VN1R83P-201ENST00000595685 445 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 AC021171.1-201ENST00000603137 706 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AL353778.1-201ENST00000603149 408 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC013444.2-201ENST00000603317 787 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AL583856.2-201ENST00000606298 543 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC016877.3-201ENST00000606778 504 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AL445423.1-201ENST00000609941 536 ntBASIC4.7□□□□□ -1.66
CDH12P55289 U6.48-201ENST00000618523 106 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC026124.2-201ENST00000621847 656 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC015871.5-202ENST00000623252 701 ntBASIC4.7□□□□□ -1.66
CDH12P55289 OR1S1-201ENST00000624470 978 ntBASIC4.7□□□□□ -1.66
CDH12P55289 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.7□□□□□ -1.66
CDH12P55289 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 ZNF652P1-201ENST00000442420 1309 ntBASIC4.7□□□□□ -1.66
CDH12P55289 AC235565.1-201ENST00000456962 1325 ntBASIC4.7□□□□□ -1.66
CDH12P55289 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDH12P55289 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.7□□□□□ -1.66
CDH12P55289 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms