Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP98P52948 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.11□□□□□ -1.59
NUP98P52948 MIR432-201ENST00000606207 94 ntBASIC5.11□□□□□ -1.59
NUP98P52948 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.11□□□□□ -1.59
NUP98P52948 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NUP98P52948 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP98P52948 AC004656.1-201ENST00000568479 4951 ntBASIC5.1□□□□□ -1.59
NUP98P52948 FAM91A3P-201ENST00000456826 2544 ntBASIC5.1□□□□□ -1.59
NUP98P52948 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP98P52948 SNORA71.3-201ENST00000362582 128 ntBASIC5.1□□□□□ -1.59
NUP98P52948 SNORA5A-201ENST00000384111 134 ntBASIC5.1□□□□□ -1.59
NUP98P52948 AL139247.1-201ENST00000422768 325 ntBASIC5.1□□□□□ -1.59
NUP98P52948 AC073335.1-201ENST00000427776 363 ntBASIC5.1□□□□□ -1.59
NUP98P52948 OR4F13P-201ENST00000428478 931 ntBASIC5.1□□□□□ -1.59
NUP98P52948 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP98P52948 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP98P52948 RPS3AP6-201ENST00000484430 795 ntBASIC5.1□□□□□ -1.59
NUP98P52948 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP98P52948 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP98P52948 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP98P52948 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
NUP98P52948 AC090912.3-201ENST00000609775 533 ntBASIC5.1□□□□□ -1.59
NUP98P52948 AC140113.4-201ENST00000622087 222 ntBASIC5.1□□□□□ -1.59
NUP98P52948 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
NUP98P52948 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP98P52948 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP98P52948 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP98P52948 RNA5SP97-201ENST00000365006 84 ntBASIC5.09□□□□□ -1.59
NUP98P52948 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP98P52948 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP98P52948 snoU13.22-201ENST00000459428 104 ntBASIC5.09□□□□□ -1.59
NUP98P52948 RPL7P15-201ENST00000461190 712 ntBASIC5.09□□□□□ -1.59
NUP98P52948 AC006517.1-201ENST00000480485 328 ntBASIC5.09□□□□□ -1.59
NUP98P52948 USP9YP2-201ENST00000504503 1000 ntBASIC5.09□□□□□ -1.59
NUP98P52948 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP98P52948 USP9YP1-201ENST00000513521 1002 ntBASIC5.09□□□□□ -1.59
NUP98P52948 RN7SKP46-201ENST00000515942 234 ntBASIC5.09□□□□□ -1.59
NUP98P52948 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.09□□□□□ -1.59
NUP98P52948 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.09□□□□□ -1.59
NUP98P52948 AC019278.1-201ENST00000623516 479 ntBASIC5.09□□□□□ -1.59
NUP98P52948 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP98P52948 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NUP98P52948 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
NUP98P52948 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NUP98P52948 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUP98P52948 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
NUP98P52948 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUP98P52948 ATP5F1P3-201ENST00000397213 657 ntBASIC5.09□□□□□ -1.6
NUP98P52948 RN7SKP159-201ENST00000410657 292 ntBASIC5.09□□□□□ -1.6
NUP98P52948 AC006946.1-201ENST00000429106 328 ntBASIC5.09□□□□□ -1.6
NUP98P52948 AC083863.1-201ENST00000438811 231 ntBASIC5.09□□□□□ -1.6
NUP98P52948 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
NUP98P52948 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.6
NUP98P52948 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.09□□□□□ -1.6
NUP98P52948 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.09□□□□□ -1.6
NUP98P52948 QTRT1P1-201ENST00000604344 1078 ntBASIC5.09□□□□□ -1.6
NUP98P52948 AL354798.1-201ENST00000622505 329 ntBASIC5.09□□□□□ -1.6
NUP98P52948 AC004777.1-201ENST00000624317 287 ntBASIC5.09□□□□□ -1.6
NUP98P52948 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NUP98P52948 AP000432.2-201ENST00000624164 2048 ntBASIC5.08□□□□□ -1.6
NUP98P52948 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP98P52948 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP98P52948 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP98P52948 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NUP98P52948 RNA5SP387-201ENST00000364226 106 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AC233289.1-201ENST00000403700 508 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NUP98P52948 RPL37P1-201ENST00000432310 284 ntBASIC5.08□□□□□ -1.6
NUP98P52948 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP98P52948 TPT1P1-201ENST00000458495 518 ntBASIC5.08□□□□□ -1.6
NUP98P52948 PPIAP15-201ENST00000479662 484 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.08□□□□□ -1.6
NUP98P52948 AC108022.1-201ENST00000493466 478 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
NUP98P52948 AC100770.1-201ENST00000532310 322 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.08□□□□□ -1.6
NUP98P52948 AC008739.3-201ENST00000603262 127 ntBASIC5.08□□□□□ -1.6
NUP98P52948 AL049634.3-201ENST00000604968 457 ntBASIC5.08□□□□□ -1.6
NUP98P52948 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.08□□□□□ -1.6
NUP98P52948 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP98P52948 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
NUP98P52948 AL138820.1-201ENST00000617901 5305 ntBASIC5.08□□□□□ -1.6
NUP98P52948 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP98P52948 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 SNORA62.3-201ENST00000365110 153 ntBASIC5.07□□□□□ -1.6
NUP98P52948 PTMAP2-201ENST00000397627 327 ntBASIC5.07□□□□□ -1.6
NUP98P52948 AL035246.1-201ENST00000433554 1255 ntBASIC5.07□□□□□ -1.6
NUP98P52948 CYCSP43-201ENST00000438233 310 ntBASIC5.07□□□□□ -1.6
NUP98P52948 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP98P52948 PPP1R11P1-201ENST00000486095 376 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms