Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.97□□□□□ -1.45
MSH6P52701 AC120057.2-201ENST00000571520 271 ntBASIC5.97□□□□□ -1.45
MSH6P52701 AC090181.2-201ENST00000602975 672 ntBASIC5.97□□□□□ -1.45
MSH6P52701 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.97□□□□□ -1.45
MSH6P52701 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.97□□□□□ -1.45
MSH6P52701 AL021997.2-201ENST00000615674 271 ntBASIC5.97□□□□□ -1.45
MSH6P52701 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MSH6P52701 AC073346.2-201ENST00000624724 2058 ntBASIC5.97□□□□□ -1.45
MSH6P52701 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
MSH6P52701 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.97□□□□□ -1.45
MSH6P52701 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MSH6P52701 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH6P52701 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MSH6P52701 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MSH6P52701 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
MSH6P52701 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
MSH6P52701 AL359922.3-201ENST00000624779 1670 ntBASIC5.96□□□□□ -1.45
MSH6P52701 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
MSH6P52701 RPS20P14-201ENST00000412545 360 ntBASIC5.96□□□□□ -1.45
MSH6P52701 TPT1P2-201ENST00000413105 503 ntBASIC5.96□□□□□ -1.45
MSH6P52701 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
MSH6P52701 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
MSH6P52701 AC069304.1-201ENST00000491593 704 ntBASIC5.96□□□□□ -1.45
MSH6P52701 AC006499.5-201ENST00000505037 514 ntBASIC5.96□□□□□ -1.45
MSH6P52701 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.96□□□□□ -1.45
MSH6P52701 RNA5SP303-201ENST00000516192 130 ntBASIC5.96□□□□□ -1.45
MSH6P52701 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
MSH6P52701 OR51C1P-201ENST00000608504 942 ntBASIC5.96□□□□□ -1.45
MSH6P52701 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.96□□□□□ -1.45
MSH6P52701 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
MSH6P52701 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
MSH6P52701 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MSH6P52701 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.96□□□□□ -1.46
MSH6P52701 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MSH6P52701 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
MSH6P52701 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MSH6P52701 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MSH6P52701 AC005005.4-201ENST00000623789 16698 ntBASIC5.95□□□□□ -1.46
MSH6P52701 AL355852.1-201ENST00000454081 1771 ntBASIC5.95□□□□□ -1.46
MSH6P52701 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 NDUFB4P4-201ENST00000404822 243 ntBASIC5.95□□□□□ -1.46
MSH6P52701 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.95□□□□□ -1.46
MSH6P52701 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.95□□□□□ -1.46
MSH6P52701 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.95□□□□□ -1.46
MSH6P52701 ATP5G1P3-201ENST00000463301 410 ntBASIC5.95□□□□□ -1.46
MSH6P52701 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.95□□□□□ -1.46
MSH6P52701 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.95□□□□□ -1.46
MSH6P52701 RNA5SP249-201ENST00000516127 99 ntBASIC5.95□□□□□ -1.46
MSH6P52701 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.95□□□□□ -1.46
MSH6P52701 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.95□□□□□ -1.46
MSH6P52701 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.95□□□□□ -1.46
MSH6P52701 AC016590.3-201ENST00000611171 753 ntBASIC5.95□□□□□ -1.46
MSH6P52701 AL354798.1-201ENST00000622505 329 ntBASIC5.95□□□□□ -1.46
MSH6P52701 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 AL929601.4-201ENST00000613011 1341 ntBASIC5.95□□□□□ -1.46
MSH6P52701 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.95□□□□□ -1.46
MSH6P52701 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
MSH6P52701 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.95□□□□□ -1.46
MSH6P52701 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
MSH6P52701 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.95□□□□□ -1.46
MSH6P52701 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
MSH6P52701 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.94□□□□□ -1.46
MSH6P52701 AL079305.1-201ENST00000623159 3008 ntBASIC5.94□□□□□ -1.46
MSH6P52701 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 MIR34B-201ENST00000385076 84 ntBASIC5.94□□□□□ -1.46
MSH6P52701 PTMAP5-201ENST00000393073 333 ntBASIC5.94□□□□□ -1.46
MSH6P52701 RN7SKP177-201ENST00000410567 355 ntBASIC5.94□□□□□ -1.46
MSH6P52701 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 AC110792.1-201ENST00000491826 472 ntBASIC5.94□□□□□ -1.46
MSH6P52701 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.94□□□□□ -1.46
MSH6P52701 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.94□□□□□ -1.46
MSH6P52701 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.94□□□□□ -1.46
MSH6P52701 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.94□□□□□ -1.46
MSH6P52701 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MSH6P52701 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 AC024560.2-201ENST00000507981 1497 ntBASIC5.94□□□□□ -1.46
MSH6P52701 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
MSH6P52701 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
MSH6P52701 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
MSH6P52701 RNU4-6P-201ENST00000410804 122 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms