Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GTF2A1P52655 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
GTF2A1P52655 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.24□□□□□ -1.73
GTF2A1P52655 BRAFP1-201ENST00000445336 2703 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.23□□□□□ -1.73
GTF2A1P52655 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
GTF2A1P52655 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GTF2A1P52655 AC010132.2-201ENST00000295493 1043 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.23□□□□□ -1.73
GTF2A1P52655 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GTF2A1P52655 RN7SKP106-201ENST00000410832 272 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 RN7SKP293-201ENST00000411389 296 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.23□□□□□ -1.73
GTF2A1P52655 BMS1P13-201ENST00000417301 885 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 RPL12P34-201ENST00000424532 479 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.23□□□□□ -1.73
GTF2A1P52655 RHOT1P3-201ENST00000436571 331 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.23□□□□□ -1.73
GTF2A1P52655 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.23□□□□□ -1.73
GTF2A1P52655 MTCO3P20-201ENST00000454926 688 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.23□□□□□ -1.73
GTF2A1P52655 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
GTF2A1P52655 COX6B1P5-201ENST00000509843 249 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.23□□□□□ -1.73
GTF2A1P52655 RN7SKP260-201ENST00000516907 149 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AC025260.1-201ENST00000548858 430 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
GTF2A1P52655 AL049779.2-201ENST00000553847 315 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AL845331.3-202ENST00000562856 261 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 FKBP1AP1-201ENST00000594588 318 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AC010424.2-201ENST00000607594 443 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 AL627230.1-201ENST00000613077 211 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 U6.98-201ENST00000637157 84 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF2A1P52655 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.23□□□□□ -1.73
GTF2A1P52655 Z82217.1-201ENST00000625157 8149 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 NXF4-202ENST00000416098 1465 ntBASIC4.23□□□□□ -1.73
GTF2A1P52655 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
GTF2A1P52655 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 ZNF542P-204ENST00000482727 1305 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.22□□□□□ -1.73
GTF2A1P52655 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 MIR184-201ENST00000384962 84 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RN7SKP285-201ENST00000410137 318 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 CDY17P-201ENST00000414121 1282 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RPS15AP6-201ENST00000420703 385 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 AC062016.2-201ENST00000420950 676 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 MTND4LP13-201ENST00000425022 298 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 OR52B5P-201ENST00000435337 951 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 ABCF2P2-201ENST00000450549 296 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 CFTRP1-201ENST00000456646 183 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RNU7-157P-201ENST00000459600 66 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 AC010468.1-201ENST00000461022 817 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 AC078785.3-201ENST00000476607 425 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 PPIAP19-201ENST00000486414 492 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RN7SL244P-201ENST00000493405 297 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 BX510359.5-201ENST00000515651 304 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 SNORD116-26-201ENST00000516006 96 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GTF2A1P52655 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF2A1P52655 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF2A1P52655 AC020978.7-201ENST00000575953 1187 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 RNVU1-4-201ENST00000612985 164 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 AC004477.3-201ENST00000614061 590 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 MIR6837-201ENST00000620884 64 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF2A1P52655 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF2A1P52655 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GTF2A1P52655 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
GTF2A1P52655 AC024560.2-201ENST00000507981 1497 ntBASIC4.22□□□□□ -1.73
GTF2A1P52655 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF2A1P52655 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GTF2A1P52655 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GTF2A1P52655 RNA5SP455-201ENST00000365190 119 ntBASIC4.21□□□□□ -1.74
GTF2A1P52655 RNU6-146P-201ENST00000384602 108 ntBASIC4.21□□□□□ -1.74
GTF2A1P52655 FCF1P5-201ENST00000406490 482 ntBASIC4.21□□□□□ -1.74
GTF2A1P52655 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.21□□□□□ -1.74
GTF2A1P52655 DDX39BP1-205ENST00000422507 192 ntBASIC4.21□□□□□ -1.74
GTF2A1P52655 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.21□□□□□ -1.74
GTF2A1P52655 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.21□□□□□ -1.74
GTF2A1P52655 RPS17P8-201ENST00000434525 335 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms