Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 AC090079.2-201ENST00000575289 768 ntBASIC4.86□□□□□ -1.63
LHX1P48742 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.86□□□□□ -1.63
LHX1P48742 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 AF230666.2-201ENST00000602328 725 ntBASIC4.86□□□□□ -1.63
LHX1P48742 AC005191.1-201ENST00000603950 358 ntBASIC4.86□□□□□ -1.63
LHX1P48742 AC115286.1-201ENST00000604298 434 ntBASIC4.86□□□□□ -1.63
LHX1P48742 LINC01808-202ENST00000641680 1116 ntBASIC4.86□□□□□ -1.63
LHX1P48742 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
LHX1P48742 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.86□□□□□ -1.63
LHX1P48742 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.86□□□□□ -1.63
LHX1P48742 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LHX1P48742 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX1P48742 AC010300.1-201ENST00000600671 5134 ntBASIC4.85□□□□□ -1.63
LHX1P48742 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
LHX1P48742 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LHX1P48742 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 RNU6-532P-201ENST00000384318 107 ntBASIC4.85□□□□□ -1.63
LHX1P48742 ELOCP19-201ENST00000411919 318 ntBASIC4.85□□□□□ -1.63
LHX1P48742 CTSL3P-202ENST00000412179 788 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AC016397.1-201ENST00000412463 242 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX1P48742 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 RPL21P43-201ENST00000425440 472 ntBASIC4.85□□□□□ -1.63
LHX1P48742 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
LHX1P48742 TDGF1P1-201ENST00000445734 527 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX1P48742 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.85□□□□□ -1.63
LHX1P48742 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.85□□□□□ -1.63
LHX1P48742 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX1P48742 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 AC107398.1-201ENST00000486904 505 ntBASIC4.85□□□□□ -1.63
LHX1P48742 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 OR51K1P-201ENST00000510214 950 ntBASIC4.85□□□□□ -1.63
LHX1P48742 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 AC015795.1-201ENST00000513669 327 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
LHX1P48742 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.85□□□□□ -1.63
LHX1P48742 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 AC015912.2-201ENST00000571053 181 ntBASIC4.85□□□□□ -1.63
LHX1P48742 TMF1P1-201ENST00000576058 373 ntBASIC4.85□□□□□ -1.63
LHX1P48742 MIR4284-201ENST00000578924 81 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.85□□□□□ -1.63
LHX1P48742 SUMO2P14-201ENST00000604488 293 ntBASIC4.85□□□□□ -1.63
LHX1P48742 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 AL035461.2-201ENST00000619201 524 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AC020978.9-201ENST00000624380 1141 ntBASIC4.85□□□□□ -1.63
LHX1P48742 AP002371.2-201ENST00000624450 503 ntBASIC4.85□□□□□ -1.63
LHX1P48742 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.85□□□□□ -1.63
LHX1P48742 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LHX1P48742 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.85□□□□□ -1.63
LHX1P48742 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LHX1P48742 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LHX1P48742 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.84□□□□□ -1.63
LHX1P48742 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LHX1P48742 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LHX1P48742 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 RNU6-249P-201ENST00000363016 102 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.84□□□□□ -1.63
LHX1P48742 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.84□□□□□ -1.63
LHX1P48742 RPS12P10-201ENST00000427031 377 ntBASIC4.84□□□□□ -1.63
LHX1P48742 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.84□□□□□ -1.63
LHX1P48742 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.84□□□□□ -1.63
LHX1P48742 HMGB1P5-202ENST00000451497 985 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC009220.1-201ENST00000451614 275 ntBASIC4.84□□□□□ -1.63
LHX1P48742 Z95152.1-201ENST00000453556 656 ntBASIC4.84□□□□□ -1.63
LHX1P48742 CYCSP34-201ENST00000458172 304 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.84□□□□□ -1.63
LHX1P48742 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LHX1P48742 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.84□□□□□ -1.63
LHX1P48742 C1GALT1P3-201ENST00000522049 819 ntBASIC4.84□□□□□ -1.63
LHX1P48742 OR8A2P-201ENST00000528631 952 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.84□□□□□ -1.63
LHX1P48742 GSTP1P1-201ENST00000548078 319 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AL049870.4-201ENST00000555741 486 ntBASIC4.84□□□□□ -1.63
LHX1P48742 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms