Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC012158.1-204ENST00000483430 465 ntBASIC4.42□□□□□ -1.7
HTTP42858 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.42□□□□□ -1.7
HTTP42858 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 NPM1P47-201ENST00000560843 856 ntBASIC4.42□□□□□ -1.7
HTTP42858 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
HTTP42858 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 AC239868.2-201ENST00000564237 4527 ntBASIC4.42□□□□□ -1.7
HTTP42858 CCAT2-201ENST00000630920 1752 ntBASIC4.42□□□□□ -1.7
HTTP42858 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HTTP42858 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.42□□□□□ -1.7
HTTP42858 RNA5SP51-201ENST00000364750 119 ntBASIC4.41□□□□□ -1.7
HTTP42858 RNA5SP120-201ENST00000410900 112 ntBASIC4.41□□□□□ -1.7
HTTP42858 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 VN1R32P-201ENST00000452234 905 ntBASIC4.41□□□□□ -1.7
HTTP42858 RANP9-201ENST00000519957 271 ntBASIC4.41□□□□□ -1.7
HTTP42858 AC005520.3-201ENST00000602874 370 ntBASIC4.41□□□□□ -1.7
HTTP42858 MIR8057-201ENST00000620957 69 ntBASIC4.41□□□□□ -1.7
HTTP42858 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 RNA5SP175-201ENST00000364275 119 ntBASIC4.41□□□□□ -1.7
HTTP42858 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.41□□□□□ -1.7
HTTP42858 AL080315.1-201ENST00000406055 466 ntBASIC4.41□□□□□ -1.7
HTTP42858 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 AC006960.3-201ENST00000561845 705 ntBASIC4.41□□□□□ -1.7
HTTP42858 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.41□□□□□ -1.7
HTTP42858 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
HTTP42858 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 AC007159.1-201ENST00000566529 4706 ntBASIC4.41□□□□□ -1.7
HTTP42858 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HTTP42858 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HTTP42858 AC233263.6-201ENST00000631132 1963 ntBASIC4.41□□□□□ -1.7
HTTP42858 SNORA3.3-201ENST00000408712 125 ntBASIC4.41□□□□□ -1.7
HTTP42858 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.41□□□□□ -1.7
HTTP42858 AC090013.1-201ENST00000485147 480 ntBASIC4.41□□□□□ -1.7
HTTP42858 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.41□□□□□ -1.7
HTTP42858 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
HTTP42858 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HTTP42858 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
HTTP42858 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HTTP42858 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.4□□□□□ -1.7
HTTP42858 AC243654.2-201ENST00000612843 443 ntBASIC4.4□□□□□ -1.7
HTTP42858 ATE1-AS1-202ENST00000636460 506 ntBASIC4.4□□□□□ -1.7
HTTP42858 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HTTP42858 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
HTTP42858 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HTTP42858 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HTTP42858 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HTTP42858 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.4□□□□□ -1.71
HTTP42858 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HTTP42858 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.4□□□□□ -1.71
HTTP42858 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.4□□□□□ -1.71
HTTP42858 AGGF1P3-201ENST00000493675 1213 ntBASIC4.4□□□□□ -1.71
HTTP42858 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.4□□□□□ -1.71
HTTP42858 AL033523.1-201ENST00000605153 153 ntBASIC4.4□□□□□ -1.71
HTTP42858 AP001642.1-201ENST00000624727 2117 ntBASIC4.4□□□□□ -1.71
HTTP42858 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.4□□□□□ -1.71
HTTP42858 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.39□□□□□ -1.71
HTTP42858 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.39□□□□□ -1.71
HTTP42858 OR8I1P-201ENST00000529291 931 ntBASIC4.39□□□□□ -1.71
HTTP42858 AC091905.2-201ENST00000623143 306 ntBASIC4.39□□□□□ -1.71
HTTP42858 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HTTP42858 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 ANKRD36P1-201ENST00000344424 659 ntBASIC4.39□□□□□ -1.71
HTTP42858 AL078604.1-201ENST00000404609 466 ntBASIC4.39□□□□□ -1.71
HTTP42858 AC079809.1-201ENST00000415468 276 ntBASIC4.39□□□□□ -1.71
HTTP42858 AC010285.3-201ENST00000511668 676 ntBASIC4.39□□□□□ -1.71
HTTP42858 AC027176.2-201ENST00000559166 746 ntBASIC4.39□□□□□ -1.71
HTTP42858 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HTTP42858 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HTTP42858 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms