Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC044797.1-201ENST00000445744 679 ntBASIC5.39□□□□□ -1.55
CIITAP33076 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 RPL21P18-201ENST00000469899 480 ntBASIC5.39□□□□□ -1.55
CIITAP33076 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.39□□□□□ -1.55
CIITAP33076 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.39□□□□□ -1.55
CIITAP33076 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.39□□□□□ -1.55
CIITAP33076 AC010476.1-201ENST00000519111 851 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AC034205.1-201ENST00000520621 638 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.39□□□□□ -1.55
CIITAP33076 AC021451.1-201ENST00000523498 1129 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.39□□□□□ -1.55
CIITAP33076 AC118942.1-201ENST00000529674 1035 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.39□□□□□ -1.55
CIITAP33076 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.39□□□□□ -1.55
CIITAP33076 AC063949.1-201ENST00000552900 865 ntBASIC5.39□□□□□ -1.55
CIITAP33076 MIR4270-201ENST00000581799 70 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AC021851.1-201ENST00000608537 1082 ntBASIC5.39□□□□□ -1.55
CIITAP33076 CYCSP41-201ENST00000616920 296 ntBASIC5.39□□□□□ -1.55
CIITAP33076 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.39□□□□□ -1.55
CIITAP33076 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 AL359715.4-201ENST00000606629 1436 ntBASIC5.39□□□□□ -1.55
CIITAP33076 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 AP000542.2-201ENST00000623199 6179 ntBASIC5.38□□□□□ -1.55
CIITAP33076 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 AC079741.1-201ENST00000321498 212 ntBASIC5.38□□□□□ -1.55
CIITAP33076 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 RNU6-796P-201ENST00000391086 107 ntBASIC5.38□□□□□ -1.55
CIITAP33076 TAF9BP2-201ENST00000400856 499 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AL034374.1-201ENST00000406329 351 ntBASIC5.38□□□□□ -1.55
CIITAP33076 RPL7P57-201ENST00000423238 740 ntBASIC5.38□□□□□ -1.55
CIITAP33076 FABP7P1-201ENST00000424004 391 ntBASIC5.38□□□□□ -1.55
CIITAP33076 CKS1BP6-201ENST00000424932 240 ntBASIC5.38□□□□□ -1.55
CIITAP33076 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 AC016831.4-201ENST00000438302 307 ntBASIC5.38□□□□□ -1.55
CIITAP33076 GTF3AP5-201ENST00000442645 697 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 MTCYBP21-201ENST00000443300 1113 ntBASIC5.38□□□□□ -1.55
CIITAP33076 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 RHEBP2-201ENST00000450289 600 ntBASIC5.38□□□□□ -1.55
CIITAP33076 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC008379.1-201ENST00000463655 464 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC006967.1-201ENST00000467608 589 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC037198.2-201ENST00000478845 733 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC090686.1-201ENST00000481577 749 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC112518.2-201ENST00000508565 425 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 RNA5SP249-201ENST00000516127 99 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.38□□□□□ -1.55
CIITAP33076 AC068993.1-201ENST00000546724 589 ntBASIC5.38□□□□□ -1.55
CIITAP33076 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 AL390334.1-201ENST00000556395 450 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC018552.1-201ENST00000562099 811 ntBASIC5.38□□□□□ -1.55
CIITAP33076 SULT1C2P2-201ENST00000562517 294 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.38□□□□□ -1.55
CIITAP33076 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.38□□□□□ -1.55
CIITAP33076 AL606834.3-201ENST00000602615 496 ntBASIC5.38□□□□□ -1.55
CIITAP33076 AL512427.1-201ENST00000618593 349 ntBASIC5.38□□□□□ -1.55
CIITAP33076 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 AC093875.1-201ENST00000623688 504 ntBASIC5.38□□□□□ -1.55
CIITAP33076 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CIITAP33076 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 AC012618.3-205ENST00000637896 1496 ntBASIC5.38□□□□□ -1.55
CIITAP33076 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CIITAP33076 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CIITAP33076 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CIITAP33076 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.37□□□□□ -1.55
CIITAP33076 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.37□□□□□ -1.55
CIITAP33076 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CIITAP33076 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CIITAP33076 AC096533.1-201ENST00000411645 353 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.37□□□□□ -1.55
CIITAP33076 AL353898.1-201ENST00000444055 238 ntBASIC5.37□□□□□ -1.55
CIITAP33076 AC023512.1-201ENST00000444513 499 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms