Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC138832.1-201ENST00000522871 556 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 OR8G5-201ENST00000524943 1041 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA13P31271 AL049870.4-201ENST00000555741 486 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA13P31271 AC015912.2-201ENST00000571053 181 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 MIR4284-201ENST00000578924 81 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HOXA13P31271 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA13P31271 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA13P31271 AL049844.2-201ENST00000604280 628 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL356218.2-201ENST00000605264 187 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AC120053.1-201ENST00000607706 736 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL445423.1-201ENST00000609941 536 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL163051.2-201ENST00000618976 735 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AP005019.3-201ENST00000620418 560 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 OR2L1P-202ENST00000641567 1023 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AC025031.4-201ENST00000621248 3271 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 AL672167.1-203ENST00000641299 2975 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL606537.1-201ENST00000607258 2011 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AL022393.1-201ENST00000625142 1677 ntBASIC5.21□□□□□ -1.58
HOXA13P31271 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA13P31271 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA13P31271 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
HOXA13P31271 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 AL355852.1-201ENST00000454081 1771 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 VPS35P1-201ENST00000563400 1518 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 RNU6-792P-201ENST00000363490 107 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 RNU6-609P-201ENST00000365459 107 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA13P31271 AC004690.1-201ENST00000418216 328 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 COX6CP17-201ENST00000421389 185 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AL592293.2-201ENST00000422292 996 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 OR2AH1P-201ENST00000425717 928 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA13P31271 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA13P31271 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA13P31271 AC104651.2-201ENST00000447549 528 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 HMGB1P5-202ENST00000451497 985 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA13P31271 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA13P31271 AC106806.2-201ENST00000509365 500 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.2□□□□□ -1.58
HOXA13P31271 AC019227.1-201ENST00000526902 510 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
HOXA13P31271 UBTFL9-201ENST00000534504 1148 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AC122134.1-202ENST00000569111 1201 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 AC020634.1-201ENST00000608701 549 ntBASIC5.2□□□□□ -1.58
HOXA13P31271 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA13P31271 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA13P31271 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HOXA13P31271 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.2□□□□□ -1.58
HOXA13P31271 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA13P31271 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA13P31271 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA13P31271 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA13P31271 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HOXA13P31271 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXA13P31271 RAB28P1-201ENST00000411517 641 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 SNRPFP1-201ENST00000414761 252 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 CHIAP3-201ENST00000423668 1133 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 RPL12P34-201ENST00000424532 479 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA13P31271 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 CBX1P1-201ENST00000440184 427 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 EIF2S2P2-201ENST00000447161 982 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA13P31271 Z95152.1-201ENST00000453556 656 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXA13P31271 AC020890.1-201ENST00000491837 504 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 AC108043.1-201ENST00000512696 574 ntBASIC5.19□□□□□ -1.58
HOXA13P31271 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXA13P31271 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXA13P31271 MTATP6P2-201ENST00000603319 678 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms