Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL583856.2-201ENST00000606298 543 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 AC068787.1-201ENST00000623908 691 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ABCD3P28288 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ABCD3P28288 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
ABCD3P28288 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ABCD3P28288 THAP12P5-201ENST00000405864 2275 ntBASIC4.84□□□□□ -1.64
ABCD3P28288 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.64
ABCD3P28288 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
ABCD3P28288 SAGE2P-201ENST00000420011 2126 ntBASIC4.84□□□□□ -1.64
ABCD3P28288 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ABCD3P28288 AL355852.1-201ENST00000454081 1771 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC023421.1-201ENST00000590535 1785 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ABCD3P28288 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ABCD3P28288 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 U3.3-201ENST00000362986 216 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 RNU6-619P-201ENST00000365146 108 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
ABCD3P28288 MIR589-201ENST00000385238 99 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ABCD3P28288 OR8V1P-201ENST00000395193 873 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 PRRC2CP1-201ENST00000404428 159 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 DUTP5-201ENST00000406790 469 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 PRELID3BP11-201ENST00000414230 479 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCD3P28288 AL449283.1-202ENST00000418249 604 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC007394.1-201ENST00000421941 531 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AL139148.1-201ENST00000427122 680 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 AL161722.2-201ENST00000434731 981 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCD3P28288 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 TCEA1P3-201ENST00000443005 880 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 HMGB3P6-201ENST00000444896 598 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 RPS27AP15-201ENST00000447672 466 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 RN7SL222P-201ENST00000476452 299 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCD3P28288 AC006427.1-201ENST00000514359 712 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCD3P28288 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 OR10V3P-201ENST00000525712 725 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCD3P28288 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCD3P28288 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.83□□□□□ -1.64
ABCD3P28288 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.83□□□□□ -1.64
ABCD3P28288 RN7SL290P-201ENST00000578661 300 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.83□□□□□ -1.64
ABCD3P28288 MTCO2P2-201ENST00000591258 225 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC095055.1-201ENST00000603472 1113 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AL160237.3-201ENST00000604114 1013 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC011626.1-201ENST00000604710 562 ntBASIC4.83□□□□□ -1.64
ABCD3P28288 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.83□□□□□ -1.64
ABCD3P28288 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ABCD3P28288 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
ABCD3P28288 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ABCD3P28288 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 BTBD10P1-201ENST00000549824 1352 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 AL034549.2-201ENST00000618285 3373 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ABCD3P28288 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 RNA5SP90-201ENST00000364801 99 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RNA5SP223-201ENST00000365174 120 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 MIR1178-201ENST00000408396 91 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 PAICSP7-201ENST00000419829 962 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ABCD3P28288 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.82□□□□□ -1.64
ABCD3P28288 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.82□□□□□ -1.64
ABCD3P28288 HSPD1P12-201ENST00000429127 1069 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 RPS29P10-201ENST00000439197 166 ntBASIC4.82□□□□□ -1.64
ABCD3P28288 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.82□□□□□ -1.64
ABCD3P28288 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms