Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.1□□□□□ -1.11
PTPREP23469 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PTPREP23469 AC123769.2-201ENST00000624332 5984 ntBASIC8.1□□□□□ -1.11
PTPREP23469 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPREP23469 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PTPREP23469 AC003985.2-201ENST00000562268 1669 ntBASIC8.09□□□□□ -1.11
PTPREP23469 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.09□□□□□ -1.11
PTPREP23469 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 RNU6-1115P-201ENST00000362490 106 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RN7SKP130-201ENST00000364924 301 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RNU6-108P-201ENST00000365558 107 ntBASIC8.09□□□□□ -1.11
PTPREP23469 Y_RNA.373-201ENST00000365600 103 ntBASIC8.09□□□□□ -1.11
PTPREP23469 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPREP23469 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 RNU6-1013P-201ENST00000384180 107 ntBASIC8.09□□□□□ -1.11
PTPREP23469 Y_RNA.455-201ENST00000384230 98 ntBASIC8.09□□□□□ -1.11
PTPREP23469 MIR514A2-201ENST00000385131 88 ntBASIC8.09□□□□□ -1.11
PTPREP23469 MIR514A3-201ENST00000385132 88 ntBASIC8.09□□□□□ -1.11
PTPREP23469 SNORD37.1-201ENST00000390968 65 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AL121972.1-201ENST00000402023 252 ntBASIC8.09□□□□□ -1.11
PTPREP23469 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC8.09□□□□□ -1.11
PTPREP23469 RN7SKP158-201ENST00000410453 326 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RN7SKP254-201ENST00000410685 310 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC8.09□□□□□ -1.11
PTPREP23469 UQCRBP1-201ENST00000421129 336 ntBASIC8.09□□□□□ -1.11
PTPREP23469 UQCRHP1-204ENST00000424609 274 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC019097.1-201ENST00000424783 735 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AHCYP8-201ENST00000425108 209 ntBASIC8.09□□□□□ -1.11
PTPREP23469 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RPL7AP71-201ENST00000451120 739 ntBASIC8.09□□□□□ -1.11
PTPREP23469 SBDSP1-204ENST00000453858 737 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC104308.1-201ENST00000454621 333 ntBASIC8.09□□□□□ -1.11
PTPREP23469 NF1P3-201ENST00000457709 450 ntBASIC8.09□□□□□ -1.11
PTPREP23469 SLC25A51P1-201ENST00000468432 871 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RN7SL70P-201ENST00000478322 302 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC093878.1-201ENST00000515630 432 ntBASIC8.09□□□□□ -1.11
PTPREP23469 RNU6-1004P-201ENST00000516584 111 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC027309.2-201ENST00000520566 192 ntBASIC8.09□□□□□ -1.11
PTPREP23469 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC8.09□□□□□ -1.11
PTPREP23469 AC026458.1-201ENST00000564330 438 ntBASIC8.09□□□□□ -1.11
PTPREP23469 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 MIR5690-201ENST00000583739 73 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AL390877.1-201ENST00000605704 214 ntBASIC8.09□□□□□ -1.11
PTPREP23469 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 AC034229.6-201ENST00000623704 224 ntBASIC8.09□□□□□ -1.11
PTPREP23469 AC010149.2-201ENST00000637608 315 ntBASIC8.09□□□□□ -1.11
PTPREP23469 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC8.09□□□□□ -1.11
PTPREP23469 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 CDC27P3-201ENST00000635418 1910 ntBASIC8.09□□□□□ -1.11
PTPREP23469 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PTPREP23469 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
PTPREP23469 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.09□□□□□ -1.12
PTPREP23469 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
PTPREP23469 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 AC091544.5-201ENST00000620192 3815 ntBASIC8.08□□□□□ -1.12
PTPREP23469 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PTPREP23469 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC8.08□□□□□ -1.12
PTPREP23469 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 RN7SKP171-201ENST00000364417 303 ntBASIC8.08□□□□□ -1.12
PTPREP23469 RN7SKP189-201ENST00000365042 330 ntBASIC8.08□□□□□ -1.12
PTPREP23469 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 RNU6-98P-201ENST00000384173 107 ntBASIC8.08□□□□□ -1.12
PTPREP23469 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.08□□□□□ -1.12
PTPREP23469 RNA5SP155-201ENST00000411154 129 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC073264.1-201ENST00000411508 416 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AC074085.1-201ENST00000413598 418 ntBASIC8.08□□□□□ -1.12
PTPREP23469 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 AL590609.2-201ENST00000421430 368 ntBASIC8.08□□□□□ -1.12
PTPREP23469 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPREP23469 FABP7P2-201ENST00000429946 379 ntBASIC8.08□□□□□ -1.12
PTPREP23469 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPREP23469 AL354714.5-201ENST00000450131 590 ntBASIC8.08□□□□□ -1.12
PTPREP23469 RPS20P21-201ENST00000466859 343 ntBASIC8.08□□□□□ -1.12
PTPREP23469 RPS4XP23-201ENST00000487801 237 ntBASIC8.08□□□□□ -1.12
PTPREP23469 RPSAP51-201ENST00000497462 645 ntBASIC8.08□□□□□ -1.12
PTPREP23469 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPREP23469 AC139272.1-201ENST00000505516 640 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms