Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
CHGAP10645 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.38□□□□□ -0.91
CHGAP10645 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 AL034417.4-202ENST00000642135 2236 ntBASIC9.38□□□□□ -0.91
CHGAP10645 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CHGAP10645 SNORA63C-201ENST00000364578 129 ntBASIC9.38□□□□□ -0.91
CHGAP10645 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC9.38□□□□□ -0.91
CHGAP10645 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC9.38□□□□□ -0.91
CHGAP10645 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 RPS20P2-201ENST00000402520 389 ntBASIC9.38□□□□□ -0.91
CHGAP10645 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC9.38□□□□□ -0.91
CHGAP10645 RNU2-28P-201ENST00000410457 189 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC016769.2-201ENST00000414815 475 ntBASIC9.38□□□□□ -0.91
CHGAP10645 RPL26P29-201ENST00000415623 438 ntBASIC9.38□□□□□ -0.91
CHGAP10645 ELOCP4-201ENST00000420090 333 ntBASIC9.38□□□□□ -0.91
CHGAP10645 OR10T1P-201ENST00000424327 947 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC9.38□□□□□ -0.91
CHGAP10645 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC9.38□□□□□ -0.91
CHGAP10645 AC236972.2-201ENST00000434979 310 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AL391987.1-201ENST00000441025 200 ntBASIC9.38□□□□□ -0.91
CHGAP10645 BRK1P2-201ENST00000442875 223 ntBASIC9.38□□□□□ -0.91
CHGAP10645 DEFA11P-201ENST00000446470 261 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AL136380.1-201ENST00000447970 162 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CHGAP10645 RPL23AP71-201ENST00000470966 469 ntBASIC9.38□□□□□ -0.91
CHGAP10645 RPS26P24-201ENST00000497656 331 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC103851.1-201ENST00000506833 274 ntBASIC9.38□□□□□ -0.91
CHGAP10645 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC9.38□□□□□ -0.91
CHGAP10645 RN7SKP283-201ENST00000517197 270 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AP005597.4-201ENST00000526762 229 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AP003181.2-201ENST00000528941 181 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC008126.1-201ENST00000549019 480 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC079905.1-201ENST00000549280 475 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC9.38□□□□□ -0.91
CHGAP10645 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC9.38□□□□□ -0.91
CHGAP10645 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC9.38□□□□□ -0.91
CHGAP10645 AL953862.2-201ENST00000603089 820 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC008966.2-201ENST00000606157 453 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC105429.2-201ENST00000610567 517 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AL356274.1-201ENST00000617064 410 ntBASIC9.38□□□□□ -0.91
CHGAP10645 AC099654.6-201ENST00000636487 512 ntBASIC9.38□□□□□ -0.91
CHGAP10645 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.38□□□□□ -0.91
CHGAP10645 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CHGAP10645 AC108467.2-201ENST00000617640 1597 ntBASIC9.37□□□□□ -0.91
CHGAP10645 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
CHGAP10645 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
CHGAP10645 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC9.37□□□□□ -0.91
CHGAP10645 AC027575.3-201ENST00000583058 2747 ntBASIC9.37□□□□□ -0.91
CHGAP10645 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 AC015871.3-201ENST00000618835 2261 ntBASIC9.37□□□□□ -0.91
CHGAP10645 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
CHGAP10645 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 Y_RNA.315-201ENST00000365117 102 ntBASIC9.37□□□□□ -0.91
CHGAP10645 Y_RNA.474-201ENST00000384341 102 ntBASIC9.37□□□□□ -0.91
CHGAP10645 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
CHGAP10645 TANK-203ENST00000402568 878 ntTSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 MRPL42P2-201ENST00000403169 426 ntBASIC9.37□□□□□ -0.91
CHGAP10645 ERMN-202ENST00000409216 746 ntTSL 4 BASIC9.37□□□□□ -0.91
CHGAP10645 RPS7P15-201ENST00000415804 584 ntBASIC9.37□□□□□ -0.91
CHGAP10645 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC9.37□□□□□ -0.91
CHGAP10645 AL353678.1-201ENST00000422735 741 ntBASIC9.37□□□□□ -0.91
CHGAP10645 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 AL133351.3-201ENST00000454998 193 ntBASIC9.37□□□□□ -0.91
CHGAP10645 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC9.37□□□□□ -0.91
CHGAP10645 RPL5P12-201ENST00000477071 851 ntBASIC9.37□□□□□ -0.91
CHGAP10645 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CHGAP10645 PABPC1P1-201ENST00000506347 591 ntBASIC9.37□□□□□ -0.91
CHGAP10645 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.37□□□□□ -0.91
CHGAP10645 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 AC090502.2-201ENST00000549267 280 ntBASIC9.37□□□□□ -0.91
CHGAP10645 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC9.37□□□□□ -0.91
CHGAP10645 AL591767.3-201ENST00000554632 525 ntBASIC9.37□□□□□ -0.91
CHGAP10645 TPRX1P1-201ENST00000557620 319 ntBASIC9.37□□□□□ -0.91
CHGAP10645 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC9.37□□□□□ -0.91
CHGAP10645 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms